Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2471 |
Symbol | |
ID | 4076836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2611032 |
End bp | 2612243 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638007795 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_614465 |
Protein GI | 99082311 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0311087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCATA TCGCTGTGAT TGGCGCAGGT CAGGCAGGGT CCTCCCTGGT TGCCAAGCTG CGCAAATGCG GATTTGACGG TGAGATCACC CTGATCGGTG CCGAGAAGGT GCTCCCGTAT CAACGCCCTC CGCTGTCCAA GGCCTATTTG CTGGGTGAAA TGGAACTTGA GCGCCTGTTT CTGCGGCCCG AGAGTTTTTA TGCCGAGAAC AACATCACCC TGCGTCTTGG TACCAAGGTG GATGCGATCG ACGCGGCTGC AAAGACTTTG CAGATCGGCG ACGAAACGCT GTCCTATGAT CAGCTTGTGC TCACGACTGG GTCGCACCCA CGTCACCTGC CTGCTGCCAT CGGTGGCGAT TTGGGCGGTG TGCATGTTGT GCGCGACCTT AAGGATGTAG ACGCGATGGC CCCCGCGGTT ACGGATGGCG CGCGCGCATT GATTGTCGGC GGCGGTTATA TCGGCCTCGA GGCGGCCGCG GTCTGCGCCA AACGGGGTGT ATCAGTCACG TTGGTTGAAA TGGCGGACCG CATTTTGCAA CGAGTCGCCG CGCCAGAGAC TTCCGATTAC TTCCGCGCGC TGCACAGCGC GCAAGGTGTA GACATCCGCG AGGGCGTGGG CCTGTCGCAT CTGGAGGGAG ACGCAGGCAA GGTGACCTGC GCGGTGCTGG CGGATGGCAC CCGTCTCGAT GTGGATTTTG TGGTCGTTGG TGTCGGGATC ACCCCAGCCT CTGAACTGGC CGCAGACGCG GGGCTCGAGA TCGAAAACGG CATTCGCACG GATGAGCTGG GCCGCACCTC GGATCCGGCA ATCTGGGCCG CAGGCGATTG CGCATCCTTT CCGTATAAGG GCCAGCGAAT CCGCTTGGAA AGCGTGCCAA ACGCAATTGA TCAGGCCGAA GTGGTGGCGG AAAATCTCCT AGGGGCAGAA AAAGCCTATG TGGCTACGCC CTGGTTCTGG TCGGATCAAT ACGATGTGAA ACTGCAAATT GCGGGTCTGA ATTCAGGCTA TGACAATGTT GTGACGCGTC AGGGCGCAGA TGGCTCCATG TCCTTCTGGT ATTACACCGG GGATCAACTG GTGGCTGTGG ATGCGATGAA TGATCCACGC GCTTACATGG TAGCAAAACG CTTGATCGAA GCCGGAAAAA CGGCGGACAA GGCGATTGTG GTCGATCCCG AAGCGGATCT GAAGCCGCTC CTCAAGGCAT GA
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Protein sequence | MTHIAVIGAG QAGSSLVAKL RKCGFDGEIT LIGAEKVLPY QRPPLSKAYL LGEMELERLF LRPESFYAEN NITLRLGTKV DAIDAAAKTL QIGDETLSYD QLVLTTGSHP RHLPAAIGGD LGGVHVVRDL KDVDAMAPAV TDGARALIVG GGYIGLEAAA VCAKRGVSVT LVEMADRILQ RVAAPETSDY FRALHSAQGV DIREGVGLSH LEGDAGKVTC AVLADGTRLD VDFVVVGVGI TPASELAADA GLEIENGIRT DELGRTSDPA IWAAGDCASF PYKGQRIRLE SVPNAIDQAE VVAENLLGAE KAYVATPWFW SDQYDVKLQI AGLNSGYDNV VTRQGADGSM SFWYYTGDQL VAVDAMNDPR AYMVAKRLIE AGKTADKAIV VDPEADLKPL LKA
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