| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2468 |
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| Symbol | |
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| ID | 4076833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2608608 |
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| End bp | 2609324 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007792 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_614462 |
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| Protein GI | 99082308 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.815124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0256985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCATC ACCACGGCAT GAGATTTCCG ACCCCCTTGA TCCCCGCGAC CTTGATCAAA
CGCTACAAAC GCTTTTTGGC GGATTGCCGG CTTGAGGACG GCCGCGAGAT CACGGCCCAT
TGCGCCAATC CAGGCTCGAT GATGGGCTTG GCCGAGCCGG GCATGCGGGT CTGGCTGGAA
CCCAACGACG ACCCGAAGAA AAAGCTCAAA TACGGCTGGC GGCTGGTGGA GCATACGAAT
GGCCATTTCA CCGGTGTCGA TACATCTGTT CCAAATCGTG CGCTCAAAGC CGCGCTGGAG
GCGCACGAAA TTGCAGAATT CGCCGCCTAC TCCGAGGTTC AGGCCGAGGT GAAGTACGGG
CAGAACAGCC GGATCGACTT TTTGCTGACG GATGCGAAGC TGCCGCGGTG CTATGTCGAG
GTCAAAAGCG TGACACTGTC ACGCCAGCCG GGCCTTGCGG AGTTTCCCGA TAGCGTCACC
GCGCGGGGGA CCAAACACCT TCGCGAACTA GCAGCTATGG CGGAAGCCGG CCACAGGGCC
GTGATGCTCT ATCTCGTTCA GCGTACGGAT TGCGACCGCT TTGCTCTCGC CGCTGATATA
GACCCAGCCT ACGCTGCCGA GTTCGAAACC GCCCACGCCA AAGGCGTTGA GCGGCTGGTG
ATCGGCACCA CCATCACGCC AGAGGGCGTA AAAATAGGCG ATATCCTCCC GAGCTAA
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| Protein sequence | MAHHHGMRFP TPLIPATLIK RYKRFLADCR LEDGREITAH CANPGSMMGL AEPGMRVWLE
PNDDPKKKLK YGWRLVEHTN GHFTGVDTSV PNRALKAALE AHEIAEFAAY SEVQAEVKYG
QNSRIDFLLT DAKLPRCYVE VKSVTLSRQP GLAEFPDSVT ARGTKHLREL AAMAEAGHRA
VMLYLVQRTD CDRFALAADI DPAYAAEFET AHAKGVERLV IGTTITPEGV KIGDILPS
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