Gene TM1040_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2462 
Symbol 
ID4076827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2604162 
End bp2604518 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content61% 
IMG OID638007786 
Productantibiotic biosynthesis monooxygenase 
Protein accessionYP_614456 
Protein GI99082302 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.230174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGCAG TCATATTCGA AGTTACCCCC GCAGACGGCA TGACCGACGC CTACCTCGAT 
CATGCAGCAA CGCTGCGGCC CCTGTTTGAG GATATGGAGG GCTTTATCTC AGTGGAGAGA
TTTCAGAGCC TCACGACGCC CGGCAAACTC TTGTCGCTGT CCTTCTGGGA AGATGAAGCG
GCGCTGGCGC GCTGGCGCAA GATGGAGAAG CACCGGGCCG CGCAGGCAAA AGGACGGAGC
GGCTATTTTG CGGACTACCG GTTGCGCGTG GCAGGTGTGA TCCGGGACTA CGGCATGATG
GAGCGTGAGC AGGCTCCAGA GGACAGCCGC GCCCTGCATG ATCGACCCGG GACATAA
 
Protein sequence
MIAVIFEVTP ADGMTDAYLD HAATLRPLFE DMEGFISVER FQSLTTPGKL LSLSFWEDEA 
ALARWRKMEK HRAAQAKGRS GYFADYRLRV AGVIRDYGMM EREQAPEDSR ALHDRPGT