Gene TM1040_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2461 
Symbol 
ID4076826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2603833 
End bp2604165 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content58% 
IMG OID638007785 
ProductNIPSNAP domain-containing protein 
Protein accessionYP_614455 
Protein GI99082301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.232841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACAT GTGTTATCCG TTATCAGATC GACCCGACCA AACAGGATCA GTTCCGCACC 
TATGCGCAAA ACTGGGGGCA GGCGATTCCG CGAAATGGCG CAGAGCTCAT CGGCTATTTT
GCCCCGCATG AGGGCTCCAC GACGCTCGCC TATGGGATCT ATTCCATTCC CTCGCTGGCC
GCATACGAGG CCTATCGCGC CCGCCTTGCC CAAGATCCTC TCGGTCGAGA GAACTACGCA
TTTGCGCAAA AGGAAAAGTT CATTTTGCGC GAGGACCGCA CATGGCTCAC ACTGGCGTCC
AATCCCCACG GCAGCGCAGG AGACAGAGCG TGA
 
Protein sequence
MLTCVIRYQI DPTKQDQFRT YAQNWGQAIP RNGAELIGYF APHEGSTTLA YGIYSIPSLA 
AYEAYRARLA QDPLGRENYA FAQKEKFILR EDRTWLTLAS NPHGSAGDRA