| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2460 |
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| Symbol | |
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| ID | 4076942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2602719 |
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| End bp | 2603624 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638007784 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_614454 |
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| Protein GI | 99082300 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.367716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGAC TGACCGAGAT GGAAGCCTTC GCCAATGTGG TGGATCAGGG TGGCTTCACC
GACGCCGCCA AGAAGATGGG AATCTCCAAG TCGGCTGTGT CCAAACATGT GTCCAGTCTC
GAAGCGCGCC TTGGCGCGCG CTTGTTGAAC CGCACCACGC GGCGGGTCTC TCCTACCGAG
ATCGGCCTTG CCTATTATGA TCGCGCGCGC CGGGTGCTTA ATGACGCAGG CGAGGCCGAT
GCATTGGTCA CCTCGATGCA ATCGGCGCCT TCCGGGCTTC TGCGGATCTC CGTAGCGACA
GATTTTGGGG TCAACCATCT CTCGCCGGTG CTGTCGGATT TCCTGCGCGA TTTTCCCGAT
ATTACGGTCA ACATGGTGCT CAACAATCGC TTCGTGGAGC TGATCTCCGA AGGTTTTGAC
ATGGCGTTGC GCATCGGAGA GCTGGAAGAC AGCTCACTTC GGGCGCGCAA GCTCACAGAG
ACCACCAAGC GGATGGTGGC CGCCCCCGAA TACCTCGAGA AATATGGCCG ACCGCAGAAG
ATTGATGATC TGAACGAGCA CAAGCTCCTG CATTATTCCA ACCAGTCCAG CGGCAACGTC
TGGAAGCTGA CCGCGCCCTC GGGCGAGAAG CGACAGGTGC GCTCGACAGG TTGGCTTTCG
GTGAACGATG GCCAGTCGCT CCTGAACGCA GCGATCTCTG GTTTGGGGAT CGCCTATCTG
CCCAGCTATC TTTACGCTGA GGCCAAGGCC GAAGGACTGG TTGAGGACGT GATGCCCTCG
CTGCCAGTCG AAACGCTCGG GATCTATGCG GTTTACCCGC CGGGGCGTTT TACCCAACCC
AAGGTGCGCG CATTCATTGA CTTTCTCGTT CATGCCTTTG CCGAAAAAGG CATGGAAACC
TGGTAG
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| Protein sequence | MDRLTEMEAF ANVVDQGGFT DAAKKMGISK SAVSKHVSSL EARLGARLLN RTTRRVSPTE
IGLAYYDRAR RVLNDAGEAD ALVTSMQSAP SGLLRISVAT DFGVNHLSPV LSDFLRDFPD
ITVNMVLNNR FVELISEGFD MALRIGELED SSLRARKLTE TTKRMVAAPE YLEKYGRPQK
IDDLNEHKLL HYSNQSSGNV WKLTAPSGEK RQVRSTGWLS VNDGQSLLNA AISGLGIAYL
PSYLYAEAKA EGLVEDVMPS LPVETLGIYA VYPPGRFTQP KVRAFIDFLV HAFAEKGMET
W
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