Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2454 |
Symbol | |
ID | 4076936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2596656 |
End bp | 2597144 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638007778 |
Product | MarR family transcriptional regulator |
Protein accession | YP_614448 |
Protein GI | 99082294 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0859924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCATG TGGACTTCGT TTTAGAGCAA TGGCGACGGG AACGCCCCGA CCTTGATGTC ACCGCAATGG GGGTGATCGG CCGGGTGAGC AGGCTTCAGC TTGAATACTC CAAGGCAATG GCGAAAACCT TTGCCAGCTT TGGGTTGAAC GGTGCGAAGT TCGATGTTCT GGCGACCCTG CGGCGTGCTG GGGTTCCGCA TTGTCTCTCT GCCGGAGACC TCATGAAGGC AACGATGGTG GCTTCCGGGA CGATGACAAA CCGGATCGAT CGTCTTGAGG CGGACGGGCT GGTCACGCGT ACGACAAATC CCAGCGATAG CCGGAGTTTC CTGATTGCGC TGACCGACAA GGGGATTGCT CTGATCGATC AGGTCGTCGA GGCACATGTG GCCACGCAGG CTTCGCTTCT TGAGGGGCTG TCGACGGCCG ACGTGGAAAA TCTGGCGCAG CTTTTGTCAA AGGCCCTGAC CGCCGCAGGC CGCAGCTGA
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Protein sequence | MDHVDFVLEQ WRRERPDLDV TAMGVIGRVS RLQLEYSKAM AKTFASFGLN GAKFDVLATL RRAGVPHCLS AGDLMKATMV ASGTMTNRID RLEADGLVTR TTNPSDSRSF LIALTDKGIA LIDQVVEAHV ATQASLLEGL STADVENLAQ LLSKALTAAG RS
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