Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2448 |
Symbol | |
ID | 4076930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2589284 |
End bp | 2589949 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007772 |
Product | OmpA/MotB |
Protein accession | YP_614442 |
Protein GI | 99082288 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.777464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.153951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTTG CAAAACTCCC CGCTCTTGGC GTATTGACCG CCGCCGTTGC CCTCAGTGCC TGTGATGATC CTGCGTCCTA CGGTGCGCCC GGCGGGATCA ACCGCTCTCA GAACGGGGCT ATCATCGGTG GCTTGATCGG GGCTGGCATT GGCGCTGCGA CTGCGGATGA CGACAAGGCG GAAACGATTA TCGGGACCGC TGCGGTTGGA GCGCTTGCGG GCGGGCTGAT TGGTCGTGAA CTCGACAAGC AGGAGGCCGA GCTGCGCCAG AGTCTCGACA ATGACTCAAT TTCGATCGTC AATACCGGCG ATCGCCTGAT CGTCTCGCTG CCCAATGATC TGACGTTTGC CACCGACAGT GCAGCGATCT CCTCGGTGGT GCGCAGCGAC CTGCGCAAGG TGGCGGGTAG CCTGCAGCGC TATCCCGGCA GCATCGTGCA AGTTATCGGT CATACGGACA GCGATGGGGC TGCGTCTTAT AACTACAGCT TGTCCGAGCG CCGTGCCAAC GCCGTCGCGG ATGAGATTGC AGCAGGCGGC GTGTCCTACG GCCGTATGCG GATCATTGGG CGCGGCGAAG ACCAACCCGT TGCCAGCAAC CTCACGCCCG AAGGCAAAGC GCGTAATCGG CGGGTTGAAA TCGTGATCAT CCCGCAAGCA AGCTGA
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Protein sequence | MSFAKLPALG VLTAAVALSA CDDPASYGAP GGINRSQNGA IIGGLIGAGI GAATADDDKA ETIIGTAAVG ALAGGLIGRE LDKQEAELRQ SLDNDSISIV NTGDRLIVSL PNDLTFATDS AAISSVVRSD LRKVAGSLQR YPGSIVQVIG HTDSDGAASY NYSLSERRAN AVADEIAAGG VSYGRMRIIG RGEDQPVASN LTPEGKARNR RVEIVIIPQA S
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