Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2434 |
Symbol | |
ID | 4076916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2574242 |
End bp | 2575417 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638007756 |
Product | elongation factor Tu |
Protein accession | YP_614428 |
Protein GI | 99082274 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.349806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGG AAAAGTTTGA GCGTAATAAA CCGCACGTCA ACATCGGCAC CGTTGGCCAC GTTGACCACG GTAAAACCAC GCTGACCGCA GCAATCACCA AATACTTCGG CGACTTCAAG GCATACGACC AGATCGATGG CGCGCCGGAA GAAAAAGCCC GTGGTATCAC CATCTCCACC GCCCACGTGG AATATGAAAC TGAAGGCCGT CACTACGCAC ACGTCGACTG CCCCGGCCAC GCTGACTATG TGAAAAACAT GATCACCGGT GCGGCGCAGA TGGACGGCGC GATCCTGGTT GTGAACGCAG CCGACGGCCC GATGCCCCAG ACCCGCGAGC ACATCCTGCT GGCGCGTCAG GTTGGCGTTC CCGCGCTGGT CGTGTTCATG AACAAAGTGG ACCAGGTCGA CGACGAAGAG CTGCTCGAGC TCGTCGAGAT GGAAATCCGC GAACTGCTGT CGTCCTACGA CTTCCCCGGC GACGATATCC CGATCATCGC AGGTTCCGCT CTGGCGGCGA TGGAAGGCCG TGACCCGGAA ATCGGCGAAA ACAAGATCAA GGAACTGATG GCGGCTGTGG ATGAGTACAT CCCGACCCCC GAGCGCGCTG TTGACCAGCC GTTCCTGATG CCGATCGAAG ACGTGTTCTC GATCTCTGGC CGTGGTACCG TTGTGACCGG TCGTGTTGAG CGTGGCGTGA TCAATGTTGG CGACAACATC GAAATCGTTG GCATCAAAGA CACCACCACC ACCACCTGTA CCGGTGTGGA AATGTTCCGC AAACTGCTGG ACCGCGGTGA AGCAGGCGAC AACATCGGCG CCCTGCTGCG TGGTATCGAC CGTGAAGCGG TTGAGCGTGG CCAGGTTCTG TGTAAGCCGG GCTCCGTGAC CCCGCACACC AAATTCGAGG CAGAAGCTTA TATTCTGACC AAAGAAGAAG GTGGCCGTCA CACCCCGTTC TTTGCGAACT ACCGTCCGCA GTTCTACTTC CGCACCACCG ACGTGACCGG CACCGTGACC CTGCCGGAAG GCACCGAAAT GGTGATGCCG GGCGACAACC TGAAGTTCGA AGTTGAACTG ATCGCCCCGA TCGCAATGGA AGACGGTCTG CGTTTCGCGA TCCGCGAAGG CGGCCGCACC GTTGGCGCGG GCGTTGTGTC CAAGATCCTC GCGTAA
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Protein sequence | MAKEKFERNK PHVNIGTVGH VDHGKTTLTA AITKYFGDFK AYDQIDGAPE EKARGITIST AHVEYETEGR HYAHVDCPGH ADYVKNMITG AAQMDGAILV VNAADGPMPQ TREHILLARQ VGVPALVVFM NKVDQVDDEE LLELVEMEIR ELLSSYDFPG DDIPIIAGSA LAAMEGRDPE IGENKIKELM AAVDEYIPTP ERAVDQPFLM PIEDVFSISG RGTVVTGRVE RGVINVGDNI EIVGIKDTTT TTCTGVEMFR KLLDRGEAGD NIGALLRGID REAVERGQVL CKPGSVTPHT KFEAEAYILT KEEGGRHTPF FANYRPQFYF RTTDVTGTVT LPEGTEMVMP GDNLKFEVEL IAPIAMEDGL RFAIREGGRT VGAGVVSKIL A
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