| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2424 |
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| Symbol | |
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| ID | 4076906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2564427 |
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| End bp | 2565302 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638007746 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_614418 |
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| Protein GI | 99082264 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.869175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.367716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTGA AAAAAGTCGG AATTATTGGT GCAGGTCAGA TGGGCAACGG TATCGCTCAC
GTCATGGCCC TGGCTGGATT TGATGTTGTT CTCAACGACA TAAGCCAACA AGCACTCGAC
AGCGCTCTGT CCCTGATCCA GAAGAACCTT GCCCGACAGG CCAGCAAGGG CAAGATTGCC
GACGCCGAGG TCGCCGCAGC CATGGGGCGG ATTTCCACCA GCCTGACACT GGCGGATGTG
GGCAAGACCG ATTTGGTGAT CGAGGCCGCC ACCGAGCGCG AAACCGTGAA GCAGGCGATC
TTTGAGGATC TGCTGCCGCA TCTGGAACCC CATACGATTC TAACGTCCAA CACCTCGTCG
ATTTCGATCA CGCGTCTGGC GAGCCGCACC GATCGGCCCG AGCGTTTCAT GGGGTTCCAC
TTCATGAATC CGGTACCGGT CATGCAACTC GTGGAACTCA TTCGCGGCAT CGCGACGGAT
GAGGAGACGT TCCAGACCTG TCAAACCGTG GTGGAAAAGC TGGGTAAAAC AGCGGCAAGC
GCCGAGGATT TCCCTGCCTT TATCGTCAAC CGCATCCTGA TGCCGATGAT CAACGAGGCG
GTATACACGC TTTATGAGGG CGTGGGCAGC GTGCGTTCGA TTGACGAGTC GATGAAGCTT
GGCGCCAATC ACCCGATGGG TCCGCTAGAG CTTGCAGATT TCATCGGTTT GGATACCTGT
CTTGCAATCA TGAACGTCTT GCATGACGGG CTTGCGGATA CAAAGTATCG CCCTTGCCCG
CTGCTGACAA AATATGTCGA GGCCGGCTGG CTGGGGCGTA AAACCCAGCG CGGATTCTAC
GACTACCGTG GCGAGGTTCC CGTTCCCACA CGCTGA
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| Protein sequence | MDVKKVGIIG AGQMGNGIAH VMALAGFDVV LNDISQQALD SALSLIQKNL ARQASKGKIA
DAEVAAAMGR ISTSLTLADV GKTDLVIEAA TERETVKQAI FEDLLPHLEP HTILTSNTSS
ISITRLASRT DRPERFMGFH FMNPVPVMQL VELIRGIATD EETFQTCQTV VEKLGKTAAS
AEDFPAFIVN RILMPMINEA VYTLYEGVGS VRSIDESMKL GANHPMGPLE LADFIGLDTC
LAIMNVLHDG LADTKYRPCP LLTKYVEAGW LGRKTQRGFY DYRGEVPVPT R
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