Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2403 |
Symbol | |
ID | 4076729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2540264 |
End bp | 2540974 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007725 |
Product | 4'-phosphopantetheinyl transferase |
Protein accession | YP_614397 |
Protein GI | 99082243 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2977] Phosphopantetheinyl transferase component of siderophore synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.722243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCAC CCCGACCCGC GCCACAGGAT ATCTCGCAGC AGCGCCAGCA CGCGCTGCGC CAACTCTTGT CAGATCCGAT CGCAATCGCC ACCTGCGACC CACATGGTGA CCTCCCGGAA CCCTTTGCCG AAGAAAGCGC CTGCTTGTCG CCCAATGCCG TGGAAAAGCG GCGGCGCGAA TTTGCCGCCG GGCGCGCCTC GGCGCATCAG GCGATGCGCG CGTTGGACCA ACCCTGTGCG CCGATCCTTA TCGGGCCGAA ACGCGCGCCT CTTTGGCCAG AGGGTCTGAC CGGCAGCATC ACGCATTGTG CCTCCTGCGC CATGGCGGCG GTTGGGTTTA CACGCGACTT TACCGGCATC GGCGTCGATG TCGAAGAGGA CACCCCTCTG TCGCGCGACC TGTGGGACAG CATCGCAAGC CCCGCCGAAC AGACCTGGAT CGCTGCACAG CCTGACCCCG GCCAAGCTGG CAAACTGCTG TTTTCTGCGA AAGAAGCCGC CTACAAGGCT CAGTATTCCC GTTCAGAGCG CTTTTTCGGC TTCAGTGGGC TCGAACTTGT CTTTGACACA AACAAAGGGC AGTTCACGGC CTGTTTCACC TCGGATCAAT TGCCTTACCG CAGCGGAGAT CTCCTCCGGG GTCGATTTGC GATCACCACT GGGGTAATCA TCACCGCGGT TGAAATCTCA AAGAATGAGC TGTGCCCATG A
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Protein sequence | MIAPRPAPQD ISQQRQHALR QLLSDPIAIA TCDPHGDLPE PFAEESACLS PNAVEKRRRE FAAGRASAHQ AMRALDQPCA PILIGPKRAP LWPEGLTGSI THCASCAMAA VGFTRDFTGI GVDVEEDTPL SRDLWDSIAS PAEQTWIAAQ PDPGQAGKLL FSAKEAAYKA QYSRSERFFG FSGLELVFDT NKGQFTACFT SDQLPYRSGD LLRGRFAITT GVIITAVEIS KNELCP
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