| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2396 |
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| Symbol | |
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| ID | 4076722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2520607 |
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| End bp | 2524614 |
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| Gene Length | 4008 bp |
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| Protein Length | 1335 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007718 |
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| Product | hypothetical protein |
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| Protein accession | YP_614390 |
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| Protein GI | 99082236 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACAGA ACCTCCAGAG CCTCATCTTC ACCTGTGGCC TCGCCACCTG CCCGGTCCTG
ACTCCCCTGC CCACCCTGGC ACAAGACGCG TCAGAATCTG GCGGCCTCTT GGTGTCCTTT
CTCGAGGATA CACTCTCCGG CGACAGCCGC ACGGTGAGTG TCGAGGGTCT GGAGGGCGCG
TTTTCCTCGC AGGCAAAGAT CGCCAAGCTA ACCGTCTCTG ACGCAGAGGG CATCTGGTTG
ACGGTCGAAG GAGCCGAGCT CGATTGGAAC CGCCTGGCAC TGGTACGCGG ACGCTTTTCG
GTCAATCACC TCAAGGCAGA TCGCATAACC GTGGCGCGCA GCCCGGAACC GGTGCCCGCA
GACCCGGAAT TGCCCATGCC CGAGGCGACA CCTTTCCGGC TCCCGGAATT GCCTGTGTCA
ATTGAGATCG GCGACATCGC CGCAGGTGAA ATCCGGCTTG GCGAAGCCCT GACCGGCCAA
GCAGCCTCCC TGTCGGTTGA TGGCGCGCTG ACACTAGCGG ATGGGGCGCT GGAGACCGAC
CTCAATGTGG CACGGTTGGA CAGGCGCGGT GACGCGCTCC ATCTTGCGGC GTCTTTTTCC
AACACCACCG AACAGCTCGC ACTGGATATT GCGCTCGACG AGGCACCCGG CGGCTTGCTC
TCGACCGCGA TGGACTTGCC CGGCCGCCCT GATCTACGCC TCGCCATCAA AGGCGAAGGC
TCGCTTACAG ATTTCACGGC AGACATCGGG TTTGCCAGCA ATAGCCACGA CCGCATCACA
GGGACCGTGA GCCTGAGAGG CCTGGGAGAT GTCGACAGCG ATACTGATGC GGGGCTGGCG
TTCTCGGCAG ACATCGGGGG CGACATAGAC CCGCTGCTCC CGCCCGCATA TCGCCCCTTC
TTTGGCCCCG GCATGCGCGC CAATGTCAAA GGGCGCAGCC TGAGCTCTGG CGGTGTCGAA
CTTGACAACC TCGTGCTGCG TACCCGCGCC TTGCAACTGA CCGGCGCGCT ACGCCTAGAA
GCGGGCATGT TGCAGACCGC CAATATCAAG GCTGCAATCA CAGCGCCCGA GGGGCAAGCC
GCGGTAATCC TTCCGGTGTC AGGCGCCGAC ACCACGGTTG CTGCCGTGAC GATGGATTTG
AAGAAGCCGG AAGGCGAAAA CTGGACCATC AACGCCGAAC TCGACAGCCT GCGCACAGCA
GACCTGAGCA TCAAACGCGC GGTCGTGAAC GCCGCAGGGG CGCTGGACCA AGACGCAGGT
TTTAACCTTG ATGGGGCACT TGATGCGCGG CTCAGCGGCT TTGTGCTTTC GGATCCTGCG
CTGGCTGCGG CAACCGGCAG CAAACTCAGC CTCAGCGCAC AGCTGACGAC GAAAGACGGC
GCCGATTTTC TGGTGCGCGA TCTCGAACTG CAGGGCGACT CTTATAGCGC GCGGGGCGAG
TTGCGTTTTG ACAGGCTCGA AGGAGATCTG CGCATCGCCA CCACGCTCAG TCTTCTGGCA
GAAAACCTCA GCCGGTATTC GGTGTTGGCC GGGCTGGATC TGTCAGGATC GGCAGAGGCC
GATGTGAGCG GGCATTTCCA ACCTCTGAGC GGCGCCTTCG GGGTCGATCT TGCGCTTCTG
GGGCGCGATC TTGGCACCGC AATCCCGAAT GTGGACCCGC TCTTGGTGGG AGAGAGCCGC
CTGAAACTGG TGGCCGCGCG CGACACGGCT GGAATCCGGA TTGACCAATT TCACCTGCAA
ACCGCAGAAG TATCCGCCAC CGGGCAAGGA ACGCTCGATA GTGGCGAAGG CGCGCTGCGC
CTTGATGCCA CGCTCGCACG GCTCGACCGG TTTGTGACCG ACCTGCCTGG CCCGCTCACG
CTCTCGGCGA ATTTCGACCG CAGTGGCAAC CGTCTCGACG GCACTGTCGC TTTGCGCGGG
CCACAGAAAA CCGCGATGGA TCTCGACGGC AGCTTCACGC TTGACGGTGC AGCCGATTTT
GGGTTTGAGG CCTTTGTTGG TGCGCCCGAA GCCTTTGTTC CCGAACTCGC TGGGGCGCCG
GTGATTGCAA CTGGCACGGC CACTCGGCGC GCGGCGCAAT GGACCGGGGA TATGACGCTC
ACTGCCACCG GCGGTACGCG CGCCCGGATC AAGGGGGGAT TTCATGAGGC CGACGGCGCG
ATCGACCTTG ATCTCTCCGC GCTGTTGGCG CGAGTGGAGC AATTTGCCCC TGCCATCACC
GGTCAGGCCA CGGCAAGACT GATCGCATCC CGGCGGGACG GTCAGTGGCA GGCCAAAGGT
GATGTCACGG CCCCCGGCGA TACCACCGCA ACTTTTGACG CAGGCTTTGT TGAAACCTCG
GGCGATCTTG ATCTCAAGCT GAAGGCGGAG GTGGCAGAAG TGCGCGCCTA CGCGCCAACG
CTTCCAGGGC GGGCCTCAGC GGATATTTCC GCTACCCGGC GGGCTGGCGC ATGGGCGGCA
GGGGGCAAGG TTACAGGGCC CGCAGGAACG GCGGCTGACC TCGATGTCGA GCTCAGTGAA
ACCGATGGCA CGGCCCGCGT CCGCTTTGAC GCCCTGGTGC GCGAGCTACA GCAGATTGTA
CCAGGGCTGG ACGGGGCACT GAGCGCGAAG GGGGAAGCCC GCCGCGCAGA TGGTATCTGG
ACCGTCGAGA GCACCGCAGA CGGCCCACTT GGAATGGCCT CACGGCTGGC TGGAACATGG
GATGAGGCGC GGGCAATCGC GGATGTCTCG GCCAAGGGAA CGTTGCGGCT GGAAGGGGCC
AACGCCTTTT TGAAGCCTAA TCTCATCAAG GGGCTGGCCG AATTTGATCT CGCACTGCGC
GGGCCGGCGC AACTCAATTC GGTGAGCGGC ACAATCACCA CATCCGGCGC GCAGATGGTT
CTGCCCCAAG CAGCGCAGAC CATCGAGGGG ATCTCCACCC GTATCTCGTT GAATAGTGGT
TCCGCCGCCG TGAATCTTTC GGCCCGTCCG CGTGACGGCG GGCGCATCGA GGTCAATGGC
CCGGTCTCTC TTGCCGCGCC TTATGCAGGG GATCTGCGGA TCTCGCTCGC TGACGTGGTG
CTGACCGACA ACCTGTCATT TGACACCTCC CTTGGCGGGC AGCTGCGCTT TTCGGGCGCG
CTTGCGGGAA ACAGTCGCCT CTCCGGGCGG ATCGACATTG GCGAAACCAA CTTCAACCTC
AACACAGCCG GGGGCGCTGT ATCAGCCGCG CCCATTCCGC CAATTCGCCA CGTCGGCCAA
ACGGGCGCAC AGATCGCAAC CAGAGCCCGC GCCGGCTTGA TTGAGACGGG ATCTGCGGCT
TCCAAGAGCA ACAGCAATAT CGCACTTGAT GTGCTTATCA GTGCGCCAAA CAAGATCTTT
GCGCGGGGCC GCGGGCTCAA TGCGGAACTG GGCGGCACAA TCGCGGTGGG TGGCACCACC
GCCAATCTTG CGCCTTCCGG GCAAGTGGGT CTGATCCGTG GCACCTTTGA CATTCTGGGG
CGCAGGCTGA ACCTCGACGA AGGGCGCGTG ACGCTCTTGG GCGACCTCAA GCCCTATCTG
GAGTTTGTCT CGAGCGCCAA TACCGAACAG GGCACTGCCA CCCTCTCTAT TGCCGGTCCC
CTCGATGGCC CGCAGATCAA AGTCACATCA GAGCCACCTC GACCAAGCGA AGAGGCGCTG
GCCCTGCTGC TGTTTGGGGA CAACATCCAA GACATTTCAC CGCTCGCGCT TGCGCGGCTG
GCCAGTTCTG CCCTGACACT GAGCGGTCGC GGCGGTGGCG CGAACAAGGC GCTGCGTGAC
AGCACCGGCG CCGACAATGC AGATATTGGC ATCGACAATC TCGGCGTGGG GCAGCTGGGG
CTTGGCGGGT ATCTTGCGGA CAACGTGTAC ACGGACGTGA ACGTGACCGC CGAGGGCAAC
AGCGAACTGT CGATCAACCT CGACCTTACC AAATCCCTCA CCGTGGCCGG CAAGGCCGAT
AGCGAAGGCG AGACGGGGCT CGGGGTGTAT TTCAAGCGGG ATTATTAA
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| Protein sequence | MKQNLQSLIF TCGLATCPVL TPLPTLAQDA SESGGLLVSF LEDTLSGDSR TVSVEGLEGA
FSSQAKIAKL TVSDAEGIWL TVEGAELDWN RLALVRGRFS VNHLKADRIT VARSPEPVPA
DPELPMPEAT PFRLPELPVS IEIGDIAAGE IRLGEALTGQ AASLSVDGAL TLADGALETD
LNVARLDRRG DALHLAASFS NTTEQLALDI ALDEAPGGLL STAMDLPGRP DLRLAIKGEG
SLTDFTADIG FASNSHDRIT GTVSLRGLGD VDSDTDAGLA FSADIGGDID PLLPPAYRPF
FGPGMRANVK GRSLSSGGVE LDNLVLRTRA LQLTGALRLE AGMLQTANIK AAITAPEGQA
AVILPVSGAD TTVAAVTMDL KKPEGENWTI NAELDSLRTA DLSIKRAVVN AAGALDQDAG
FNLDGALDAR LSGFVLSDPA LAAATGSKLS LSAQLTTKDG ADFLVRDLEL QGDSYSARGE
LRFDRLEGDL RIATTLSLLA ENLSRYSVLA GLDLSGSAEA DVSGHFQPLS GAFGVDLALL
GRDLGTAIPN VDPLLVGESR LKLVAARDTA GIRIDQFHLQ TAEVSATGQG TLDSGEGALR
LDATLARLDR FVTDLPGPLT LSANFDRSGN RLDGTVALRG PQKTAMDLDG SFTLDGAADF
GFEAFVGAPE AFVPELAGAP VIATGTATRR AAQWTGDMTL TATGGTRARI KGGFHEADGA
IDLDLSALLA RVEQFAPAIT GQATARLIAS RRDGQWQAKG DVTAPGDTTA TFDAGFVETS
GDLDLKLKAE VAEVRAYAPT LPGRASADIS ATRRAGAWAA GGKVTGPAGT AADLDVELSE
TDGTARVRFD ALVRELQQIV PGLDGALSAK GEARRADGIW TVESTADGPL GMASRLAGTW
DEARAIADVS AKGTLRLEGA NAFLKPNLIK GLAEFDLALR GPAQLNSVSG TITTSGAQMV
LPQAAQTIEG ISTRISLNSG SAAVNLSARP RDGGRIEVNG PVSLAAPYAG DLRISLADVV
LTDNLSFDTS LGGQLRFSGA LAGNSRLSGR IDIGETNFNL NTAGGAVSAA PIPPIRHVGQ
TGAQIATRAR AGLIETGSAA SKSNSNIALD VLISAPNKIF ARGRGLNAEL GGTIAVGGTT
ANLAPSGQVG LIRGTFDILG RRLNLDEGRV TLLGDLKPYL EFVSSANTEQ GTATLSIAGP
LDGPQIKVTS EPPRPSEEAL ALLLFGDNIQ DISPLALARL ASSALTLSGR GGGANKALRD
STGADNADIG IDNLGVGQLG LGGYLADNVY TDVNVTAEGN SELSINLDLT KSLTVAGKAD
SEGETGLGVY FKRDY
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