| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2393 |
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| Symbol | |
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| ID | 4076719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2516031 |
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| End bp | 2517155 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007715 |
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| Product | glycine cleavage system T protein |
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| Protein accession | YP_614387 |
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| Protein GI | 99082233 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.673157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATC TGAAGACCAC TCCCCTTACT GAATTGCACG AGAGCCTCGG GGCCAAGATG
GTGCCCTTTG CTGGCTACTC CATGCCTGTG CAATACCCGC TCGGGATCAT GAAAGAACAC
ACGCACACCC GCGAGAAAGC CGGGCTCTTT GATGTGAGCC ACATGGGGCA AGTGATTCTG
CGTGGAGAGA GCTATGAGGC CTTGGCCGCT GCGTTTGAAA AGCTGGTGCC GATGGATGTA
CTCGGGCTGT CCGAGGGGCG CCAACGCTAC GGGCTGTTCA CCAACGATAC GGGCGGCATC
GAGGACGACC TGATGTTCGC CAACCGCGGT GATCACCTGT TTGTGGTTGT GAACGCAGCC
TGCAAGGACG CTGACATCGC CCGCATGAAG GCCGCGCTTG AACCCGAAGT AACAGTCGAG
CCTGTCACCG ATCGCGCGCT TCTGGCCCTT CAGGGCCCTG CCGCTGAGGC GGCGCTGGAG
GCGTTGGTGC CTGGCGTTGC GGCGATGAAG TTCATGGATG TGGCAACCTT CGCATATGAA
GGCGGAGAGC TCTGGATCTC CCGCTCTGGT TATACCGGAG AGGATGGCTA TGAGATCTCC
GTCGCCGAAG CCGGCGCAGA GGCCTTTGCC AAGGCTCTGC TGGCACATGC CGACGTTGAG
GCCATTGGCC TCGGCGCACG AGATTCCCTG CGCCTTGAGG GCGGGCTTTG CCTTTATGGA
CACGACATCG ACACTGAGAC CCGCCCGTTT GAGGCCGCTC TTGGCTGGGC GATCCAAAAA
GTACGCCGCC CGGGTGGCGA CCGCGCGGGC GGCTTTCCCG GTGCGGATGC GATCTTTGCT
GATCTCGGTG GCAAGGCCCC GCGCAAACGT GTGGGTCTGA AGCCCGAGGG CCGTGCGCCG
ATGCGCGAGG GTGTTGTGCT TTACGCAAGT GCCGAAGGTG GCGACCCTAT CGGCACCATC
ACGTCTGGTG GCTTTGGTCC GACCGTTGGC GGCCCGGTCG CCATGGGCTA CGTCACCGCA
GAGCATGCTG CTCTGGACAC ACAGGTCTTT GGCGAGCTGC GCGGCAAGCG CGTGCCCGTC
ACTGTTGCAA AGCTGCCCTT CGTGGCGGCC AACTTCAAAC GCTAA
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| Protein sequence | MSDLKTTPLT ELHESLGAKM VPFAGYSMPV QYPLGIMKEH THTREKAGLF DVSHMGQVIL
RGESYEALAA AFEKLVPMDV LGLSEGRQRY GLFTNDTGGI EDDLMFANRG DHLFVVVNAA
CKDADIARMK AALEPEVTVE PVTDRALLAL QGPAAEAALE ALVPGVAAMK FMDVATFAYE
GGELWISRSG YTGEDGYEIS VAEAGAEAFA KALLAHADVE AIGLGARDSL RLEGGLCLYG
HDIDTETRPF EAALGWAIQK VRRPGGDRAG GFPGADAIFA DLGGKAPRKR VGLKPEGRAP
MREGVVLYAS AEGGDPIGTI TSGGFGPTVG GPVAMGYVTA EHAALDTQVF GELRGKRVPV
TVAKLPFVAA NFKR
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