Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2392 |
Symbol | |
ID | 4076718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2515630 |
End bp | 2515989 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638007714 |
Product | glycine cleavage system H protein |
Protein accession | YP_614386 |
Protein GI | 99082232 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.368043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACA CCGAAGAACA CGAATGGCTG CAGGTCGAAG GCGACGTTGT GACTGTTGGC ATCACCTCCC ACGCGGCCGA GCAGCTGGGC GATGTGGTCT TTGTTGAGCT TCCCGAAGTG GGCAGCGAAG TCTCCAAGGA CGACGAGATC GTGGTCATCG AATCCGTTAA GGCAGCGTCG GACATTCTCG CGCCGCTCGA CGGTGAAGTG GTCGAAGTCA ACGAGGCCAT CGTGGACGCG CCGTCCAAGG TCAATGAGGA CCCGGAAGGC GAAGCTTGGT TCTTCAAACT CAAAGTCTCC GACATGTCGC CGATGGACGA CTACATGGAC GAGGCTGGCT ACAAAGACTT CATTGGCTGA
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Protein sequence | MKYTEEHEWL QVEGDVVTVG ITSHAAEQLG DVVFVELPEV GSEVSKDDEI VVIESVKAAS DILAPLDGEV VEVNEAIVDA PSKVNEDPEG EAWFFKLKVS DMSPMDDYMD EAGYKDFIG
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