Gene TM1040_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2392 
Symbol 
ID4076718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2515630 
End bp2515989 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content57% 
IMG OID638007714 
Productglycine cleavage system H protein 
Protein accessionYP_614386 
Protein GI99082232 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.368043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACA CCGAAGAACA CGAATGGCTG CAGGTCGAAG GCGACGTTGT GACTGTTGGC 
ATCACCTCCC ACGCGGCCGA GCAGCTGGGC GATGTGGTCT TTGTTGAGCT TCCCGAAGTG
GGCAGCGAAG TCTCCAAGGA CGACGAGATC GTGGTCATCG AATCCGTTAA GGCAGCGTCG
GACATTCTCG CGCCGCTCGA CGGTGAAGTG GTCGAAGTCA ACGAGGCCAT CGTGGACGCG
CCGTCCAAGG TCAATGAGGA CCCGGAAGGC GAAGCTTGGT TCTTCAAACT CAAAGTCTCC
GACATGTCGC CGATGGACGA CTACATGGAC GAGGCTGGCT ACAAAGACTT CATTGGCTGA
 
Protein sequence
MKYTEEHEWL QVEGDVVTVG ITSHAAEQLG DVVFVELPEV GSEVSKDDEI VVIESVKAAS 
DILAPLDGEV VEVNEAIVDA PSKVNEDPEG EAWFFKLKVS DMSPMDDYMD EAGYKDFIG