| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2384 |
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| Symbol | truA |
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| ID | 4076710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2503881 |
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| End bp | 2504660 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007706 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_614378 |
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| Protein GI | 99082224 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCGTT TTGCTCTCAA AGTTGAATAT CATGGAAAGC CGTTTGCCGG TTGGCAACGG
CAGAAGGACC AACCGTCTGT TCAGGGGGCG ATTGAGGCAG CGCTCGCGCG GATCGAGCCG
GGTGAGCACA CGATTGCCGC CGCCGGACGC ACCGATACGG GGGTGCATGG GCTTGGGCAG
GTTGCGCATT GCGACCTCGA GAAGAACTGG GATCCGTTTC GCCTGAGTGA AGCACTGAAC
TACCACCTGA AGCCCGCCCC GGTTGCGATC GTGGATGCAG CCCTTGTGGA CGACGAATGG
CATGCCCGCT TCAGTGCGGT GGAGCGGCAA TATCTGTTCC GCATCCTGAT GCGCCGCGCT
CCTGCGACTC ACGATGAGGG GCAGGTCTGG CAGATCAAAC ATGATCTGGA TGTCGCGGCG
ATGCAGGCGG GAGCCAATAT GCTGCTTGGA AATCACGATT TCACCACGTT TCGCTCGTCG
ATCTGTCAGG CTGCCAGCCC GGTGAAGACC TTGGATGAGC TGAGAGTGGA GCGCGTTCAG
GGACTATCGG GTCCAGAGGT GCATTTTCAT GTGCGCGCGC GCAGCTTCCT ACACAATCAG
GTTCGCAGTT TTGTCGGAAC ACTTGAGCGT GTGGGCACCG GAGCATGGAG CCCCGAGGAC
GTCAAACACG CGCTTGAGGC CAAGGACCGC GCGGCCTGTG GTCCTGTGTG CCCGGGCCAT
GGGCTCTATC TGGCGCGGGT GGGCTATCCT GATCCGGTTT TTTCTAGCGA CCGGGTGTAA
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| Protein sequence | MPRFALKVEY HGKPFAGWQR QKDQPSVQGA IEAALARIEP GEHTIAAAGR TDTGVHGLGQ
VAHCDLEKNW DPFRLSEALN YHLKPAPVAI VDAALVDDEW HARFSAVERQ YLFRILMRRA
PATHDEGQVW QIKHDLDVAA MQAGANMLLG NHDFTTFRSS ICQAASPVKT LDELRVERVQ
GLSGPEVHFH VRARSFLHNQ VRSFVGTLER VGTGAWSPED VKHALEAKDR AACGPVCPGH
GLYLARVGYP DPVFSSDRV
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