| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2376 |
|---|
| Symbol | |
|---|
| ID | 4076495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2495256 |
|---|
| End bp | 2496125 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638007698 |
|---|
| Product | 50S ribosomal protein L11P methyltransferase |
|---|
| Protein accession | YP_614370 |
|---|
| Protein GI | 99082216 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2264] Ribosomal protein L11 methylase |
|---|
| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.06603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.387287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACAT TCACCGCCCT CACCACGCTG TCCGAAAAAG CTCAGGCAGA GGCGCTGGGC
GAGGCAATGG AACGTCTGAC CCCCGAGCCC ACGGGCATTG GCGTTTTCGA GGTCGAGGAT
GGCTCAGGCC TATGGGAAGT GGGCGGCTAT TTTACCGAAG CCCCGGATGA GGCGGGGCTG
GCGCTGTTGG CCGCAATGCA CGATGCCAAA CCCTTTGCCG TGTCCGAATT GCCAGAGACC
GACTGGGTGG CCCATGTACG CCGCGAGCTT GCCCCGGTGG AGGCTGGGCG CTTTTTTGTC
TACGGTAGCC ATGACGCCGA CAAGGTTCCC GCAGACAAGA TCCCGCTTCT GATCGAGGCG
GCCATGGCCT TTGGCACCGG GCATCACGGC ACCACGCTTG GCTGCCTCAA GGCGCTGGAT
CATCTGCTTT GCGAAGGCTT CGAAGGCAAG AAAGTGGCCG ATATTGGATG TGGCACAGCT
GTCCTTGCAA TGGCCGCTGC GCGGGTCTGG CCCACGGCGC AGATCCTGGC GAGCGACATC
GACGAGGTCG CTGTCGATGT GGCAGAGGCC AACATGGACG CCAATGGCAT GAAGGGCGCG
GTCGCATGTC TGGAGGCCGC AGGCTTTGAC GCACCAGCGC TAAAGGCTGC TGCACCGTAT
GATCTGATCT TCGCAAATAT TCTCAAAGGC CCTCTGGTGG CGCTTGCGCC GGACATGGCG
GCTCATTTGC GCGCAGGCGG GTATGCGATT CTCTCCGGGA TTTTGAACGA GCAGGCCGAT
GATGTGATTG CGGTTTATGC ACAAAACGGC ATCAATCTTG TCAAAAGGAC TGAAATTGGT
GAATGGACCA CTTTGATTTT GTCAAAGTAA
|
|---|
| Protein sequence | MPTFTALTTL SEKAQAEALG EAMERLTPEP TGIGVFEVED GSGLWEVGGY FTEAPDEAGL
ALLAAMHDAK PFAVSELPET DWVAHVRREL APVEAGRFFV YGSHDADKVP ADKIPLLIEA
AMAFGTGHHG TTLGCLKALD HLLCEGFEGK KVADIGCGTA VLAMAAARVW PTAQILASDI
DEVAVDVAEA NMDANGMKGA VACLEAAGFD APALKAAAPY DLIFANILKG PLVALAPDMA
AHLRAGGYAI LSGILNEQAD DVIAVYAQNG INLVKRTEIG EWTTLILSK
|
|---|
| |