| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2373 |
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| Symbol | ruvC |
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| ID | 4076492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2493554 |
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| End bp | 2494120 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638007695 |
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| Product | Holliday junction resolvase |
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| Protein accession | YP_614367 |
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| Protein GI | 99082213 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
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| TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.511513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGTTCGC GTTTTGTGCT AGTGCTGGCC TCCAAGCAGA CAATAAATAA TCAAAGATCG
GGCGGCGGAA TGCGCATATT GGGAATCGAT CCGGGGCTTC GGACCCTTGG ATGGGGGGTG
ATCGAATCAA ATGGCGCCCG TCTCAGCCAT GTCGCTAATG GCCTGTGCCA CTCTGATGGG
GATGACCTTG GCGAACGGCT ACTGTCGCTG CACAATCAGG TTACGGAAAT CATCGACGCC
TATCGACCGG ATCAGGCTGC CATTGAGCAG ACTTTTGTCA ACAAGGATGG CGCGGGAACG
CTCAAGCTAG GTCAGGCGCG TGGTGTCGCC TTGCTGACCT TGGCCAAAGC AGGTCTGCCG
ACGGGGGAAT ATGCGCCGAA CCGCGTGAAG AAAACCGTGG TTGGGGTCGG GCATGCCGAA
AAGGAACAGG TTCTGCATAT GGTGAAGCTG CAGCTGCCGG GTTGTGCGCC CAGGGGCGCG
GATGCGGCTG ATGCTCTGGC GATTGCGATC TGTCACGCCT ATTACGGAGG CAGCAACCAG
CGGCAACTCA AAGAGGTGGG CGCATGA
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| Protein sequence | MCSRFVLVLA SKQTINNQRS GGGMRILGID PGLRTLGWGV IESNGARLSH VANGLCHSDG
DDLGERLLSL HNQVTEIIDA YRPDQAAIEQ TFVNKDGAGT LKLGQARGVA LLTLAKAGLP
TGEYAPNRVK KTVVGVGHAE KEQVLHMVKL QLPGCAPRGA DAADALAIAI CHAYYGGSNQ
RQLKEVGA
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