Gene TM1040_2371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2371 
SymbolruvB 
ID4076490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2491837 
End bp2492856 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content64% 
IMG OID638007693 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_614365 
Protein GI99082211 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.821949 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATG CAGACCCCAC CCTGCGCCCG GAGCCTCTGC CCGAAGACAA TGATCGCGCC 
CTGCGCCCGC AGGGCCTGGG TGAGTTTATT GGCCAGGCCG AAGCCCGGGC AAACCTGCGG
GTGTTCATCG AATCCGCCCG TCGCCGTGGC GAGGCTATGG ATCACACGCT GTTTCATGGC
CCTCCAGGCC TCGGCAAGAC CACTCTGGCA CAGATCGTTG CGCGCGAGCT GGGCGTAAAT
TTCCGGATGA CATCGGGCCC GGTGCTTGCG AAGGCCGGAG ATCTGGCGGC AATCCTGACC
AACCTTGAGG CGCGCGATGT GTTGTTCATC GACGAAATTC ACCGCCTGAA CCCTGCCGTC
GAGGAAGTCC TTTACCCGGC GATGGAGGAT TTCGAGCTGG ATCTCGTGAT TGGGGAGGGG
CCAGCCGCGC GTACGGTGCG TATCGAGTTG CAGCCCTTCA CGCTTGTGGG GGCCACCACC
CGGATGGGGC TTTTGACCAC ACCGCTGCGG GATCGGTTTG GGATTCCAAC CCGGCTGCAG
TTTTACACCA TCGACGAGCT TTTTGAGATT GTCAGCCGAA ACGCGCGCAA ACTGGGCGCG
CCCGCCGATG ACGCAGGCGC GCGTGAGATC GCGCGGCGCG CGCGCGGCAC CCCAAGGATC
GCCGGACGGC TCTTGCGCCG CGTGGTGGAC TTTGCGGTTG TCGAGGGCGA TGGCACTATC
ACCCGCGAAC TGGCGGATGG GGCTCTGACA CGGCTTGGCG TGGATCAGCT GGGCCTTGAT
GGCGCGGACC GACGCTATTT GCGACTGGTT GCGGAGAATT ATGGTGGGGG CCCTGTCGGC
ATCGAAACCA TGTCCGCCGC CCTGAGCGAA AGCCGCGATG CGCTGGAAGA GGTGATCGAG
CCCTATCTGC TGCAGCAGGG CCTTATTCAG CGCACGCCGC GCGGTCGGAT GCTGGCGCAA
AAGGCCTGGA CTCATCTCGG GATTGCGCCG CCTAAATCCC AGAGCGATCT CTTTGGCTGA
 
Protein sequence
MIDADPTLRP EPLPEDNDRA LRPQGLGEFI GQAEARANLR VFIESARRRG EAMDHTLFHG 
PPGLGKTTLA QIVARELGVN FRMTSGPVLA KAGDLAAILT NLEARDVLFI DEIHRLNPAV
EEVLYPAMED FELDLVIGEG PAARTVRIEL QPFTLVGATT RMGLLTTPLR DRFGIPTRLQ
FYTIDELFEI VSRNARKLGA PADDAGAREI ARRARGTPRI AGRLLRRVVD FAVVEGDGTI
TRELADGALT RLGVDQLGLD GADRRYLRLV AENYGGGPVG IETMSAALSE SRDALEEVIE
PYLLQQGLIQ RTPRGRMLAQ KAWTHLGIAP PKSQSDLFG