Gene TM1040_2369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2369 
Symbol 
ID4076488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2490552 
End bp2490938 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content58% 
IMG OID638007691 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionYP_614363 
Protein GI99082209 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.154271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACC AGTTTCCTGT CACCGTTTAT TACGAAGACA CGGATATGGG CGGCGTCGTT 
TATCACGCCA ATTACCTGCG TTTCATCGAA CGTGCCCGCA GTGACTATGT CCGCCGCCTC
GGGGTGGATC AGAATGAGAT GCGCGACAAG GGAATCGTCT GGGTGGTGAC GCGGATTGAA
GCGGACTACC TCGCGCCAGC ACGGTTCGAG GATGAGCTGA TCGTGGAAAC CCAGCCCGAG
AAAATGACCT CGGCTCGCCT GATGATGTCT CAGGTGGTGC GGCGCGCGGG GCAAGAGCTG
TTTAGGGCCA AGGTGACTGC GGTCTGTATG GACATGTACA GCGGAAAACC TGTCCGGCTC
CCGGCAGAAG TCCGCGCATC TCTGTAA
 
Protein sequence
MSHQFPVTVY YEDTDMGGVV YHANYLRFIE RARSDYVRRL GVDQNEMRDK GIVWVVTRIE 
ADYLAPARFE DELIVETQPE KMTSARLMMS QVVRRAGQEL FRAKVTAVCM DMYSGKPVRL
PAEVRASL