| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2361 |
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| Symbol | |
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| ID | 4076480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2482013 |
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| End bp | 2483926 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007683 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_614355 |
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| Protein GI | 99082201 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.698046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.908613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCAACG CACGCAATAT CGCCTTCTGG GTCGTTCTGT TTCTACTCGT TGTGACCCTG
TTCAATCTGT TCAGCGGGTC CGGCAGCACA CTACAGAGCC GCGAGAAGAC TTATTCGGAA
TTCGTGACCG CTGTAGAGGG CGGAAACGTC AGCACTGTGA CGCTGGACGG CGAACAGGTT
CGCTACACGA CTTCGGATGG CCAGAGCTAC ACCACGATCA AACCGGGCGA CGCAGAAGTC
ACCCAAATGC TGATCGACAA CAACATCCCC GTGCGCGCAG AAAAACAGCA GCAATCGACC
TTCCAGTCCT TCCTGCTGAC GCTTCTGCCG TTCCTGCTGC TGATCGGCGT CTGGATCTAT
TTCATGAACC GCATGCAGGG CGGGGGCAAA GGTGGCGCCA TGGGCTTTGG CAAATCCAAG
GCCAAGATGC TGACCGAGAA GCATGGTCGC GTGACGTTTG ACGACGTTGC AGGTATCGAC
GAGGCGAAAG AAGAGCTCGA AGAGATCGTG GAATTCCTGC GCAACCCGCA GAAATTCTCG
CGTCTCGGCG GCAAGATCCC CAAAGGCGCG CTGCTTGTAG GCCCTCCGGG TACTGGTAAG
ACGCTCCTTG CGCGTGCGAT CGCGGGCGAG GCGGGTGTGC CGTTCTTCAC CATCTCCGGT
TCCGATTTTG TCGAGATGTT CGTTGGTGTG GGTGCAAGCC GAGTCCGCGA TATGTTTGAA
CAGGCCAAGA AGAATGCGCC CTGTATCGTC TTTATCGACG AAATCGACGC CGTGGGTCGC
CACCGGGGTG CCGGTTATGG CGGCGGCAAT GACGAGCGCG AACAGACCCT CAACCAGCTG
TTGGTTGAAA TGGACGGCTT TGAGGCCAAC GAGGGCGTGA TCATCCTAGC GGCCACCAAC
CGCAAGGACG TGCTTGACCC GGCCTTGCTG CGTCCAGGCC GCTTTGACCG CAACGTGACC
GTCGGAAACC CTGACATCAA AGGTCGCGAG AAGATCCTCG GCGTGCATGC CCGCAAGACC
CCTCTGGGTG CGGACGTGGA CCTGCGCATC ATTGCGCGTG GCACCCCGGG CTTCTCCGGC
GCGGATCTGG CGAACCTTGT GAACGAGGCT GCTTTGATGG CTGCGCGTGT GGGCCGCCGC
TTTGTCACCA TGGAAGATTT TGAAAACGCC AAGGACAAAG TCATGATGGG GGCCGAGCGC
CGCTCCATGG TGCTGACCGC CGATCAGAAG GAAAAGACTG CCTATCACGA GGCAGGTCAC
GCTGTGGTTG GTCTGAAGCT GCCGGAATGT GATCCAGTCT ACAAGGCGAC GATCATCCCC
CGTGGCGGCG CGCTTGGCAT GGTGGTGAGC CTTCCTGAGA TGGACCGTCT GAACTGGCAC
AAGGACGAGT GCGAGCAGAA GTTGGCGATG ACCATGGCCG GTAAGGCTGC CGAGATCATC
AAATATGGCC CCGGCCATGT GTCCAATGGC CCCGCCGGCG ACATTCAGCA GGCGAGCCAA
CTGGCGCGGG CCATGGTGCT GCGCTGGGGG ATGTCCGACA AGGTCGGTAA CATCGACTAC
GCCGAAGCGC ATGAGGGCTA TTCCGGCAAC ACGGCTGGGT TCTCGGTCTC TGCCAATACC
AAAGAGCTTA TCGAAGAAGA GGTCCGCCGC TTCATCGAGG AGGCCTACCA ACGCGCTTAT
CAGATCCTTG AAGAGAACAA GGATGAATGG GAGCGTCTGG CACAAGGTCT TCTGGAATAT
GAGACGCTGA CAGGCGAAGA GATCAAGCGC GTGATGAACG GCGAGCCGCC GCAGGCGGAT
GATGACGCTG ATGATGACGC CGACACCGGT GCCACCTCCG TCACCGCGAT CCCGAAGGCA
AAGTCCAAGA AAACTCCGCC CGAAGGGGAT ATGGAACCTG AGCCTTCTTC CTAA
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| Protein sequence | MGNARNIAFW VVLFLLVVTL FNLFSGSGST LQSREKTYSE FVTAVEGGNV STVTLDGEQV
RYTTSDGQSY TTIKPGDAEV TQMLIDNNIP VRAEKQQQST FQSFLLTLLP FLLLIGVWIY
FMNRMQGGGK GGAMGFGKSK AKMLTEKHGR VTFDDVAGID EAKEELEEIV EFLRNPQKFS
RLGGKIPKGA LLVGPPGTGK TLLARAIAGE AGVPFFTISG SDFVEMFVGV GASRVRDMFE
QAKKNAPCIV FIDEIDAVGR HRGAGYGGGN DEREQTLNQL LVEMDGFEAN EGVIILAATN
RKDVLDPALL RPGRFDRNVT VGNPDIKGRE KILGVHARKT PLGADVDLRI IARGTPGFSG
ADLANLVNEA ALMAARVGRR FVTMEDFENA KDKVMMGAER RSMVLTADQK EKTAYHEAGH
AVVGLKLPEC DPVYKATIIP RGGALGMVVS LPEMDRLNWH KDECEQKLAM TMAGKAAEII
KYGPGHVSNG PAGDIQQASQ LARAMVLRWG MSDKVGNIDY AEAHEGYSGN TAGFSVSANT
KELIEEEVRR FIEEAYQRAY QILEENKDEW ERLAQGLLEY ETLTGEEIKR VMNGEPPQAD
DDADDDADTG ATSVTAIPKA KSKKTPPEGD MEPEPSS
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