| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2356 |
|---|
| Symbol | |
|---|
| ID | 4076475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2477322 |
|---|
| End bp | 2478224 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638007678 |
|---|
| Product | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase |
|---|
| Protein accession | YP_614350 |
|---|
| Protein GI | 99082196 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.531119 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAG AAATCATTGA CGGGAAGGCC TTTGCGGCCA AGGTCCGCGG TCAGGTGACC
GAGCATGTGA CCCGCCTGAA AGAAGAACAC GGCATCACTC CGGGGCTGGC GGTTGTGCTG
GTCGGTGAAG ATCCGGCCTC TCAGGTCTAT GTGCGCTCCA AGGGCAAGCA GACCGTTGAG
GTGGGCATGA ACTCCTACGA GCATAAGCTC GACGCTGACA CCTCCGAAGC GGATCTCCTG
GCGCTGATTG ACCAGCTCAA CAAGGACTCC GAAGTGCATG GGATTCTGGT GCAGCTGCCT
CTGCCCAAGC ATCTCGACGA GGATCTGGTG ATCAACTCCA TCGCGCCGGA AAAAGATGTC
GATGGCTTTC ATATCTCCAA TGTGGGCCTG CTTGGGACGG GACAAAAATC CATGGTCCCC
TGTACGCCGC TTGGTTGTCT GATGATGTTG CGCGACTATC ATGGCTCGCT GTCTGGTCTC
GATGCCGTGG TGATTGGCCG CTCCAACATC GTGGGCAAGC CGATGGCTCA GCTCTTGCTG
GGGGACAGCT GCACGGTGAC GATTGCGCAT TCGCGGACCA AGGATCTGCC CGAGGTGGTG
CGCCGCGCCG ACATCGTGGT GGCGGCGGTG GGCCGTCCCG AGATGGTTCC GGGTGACTGG
ATCAAGGAAG GTGCAACCGT TATCGACGTT GGCATCAACC GCATCGACGC TCCTGAGAAG
GGCGAGGGCA AGACTCGTCT GGTGGGGGAT GTCCACTATG AGAGCGCAGC GGCGCGCGCC
GGGGCGATTA CACCGGTGCC CGGCGGGGTT GGTCCGATGA CGATTGCCTG TCTTTTGGCG
AATACGGTCA CGGCCTGCTG TCGTGCGAAC AATCTCTCCG AGCCCGAAGG CCTGACGGCC
TGA
|
|---|
| Protein sequence | MAAEIIDGKA FAAKVRGQVT EHVTRLKEEH GITPGLAVVL VGEDPASQVY VRSKGKQTVE
VGMNSYEHKL DADTSEADLL ALIDQLNKDS EVHGILVQLP LPKHLDEDLV INSIAPEKDV
DGFHISNVGL LGTGQKSMVP CTPLGCLMML RDYHGSLSGL DAVVIGRSNI VGKPMAQLLL
GDSCTVTIAH SRTKDLPEVV RRADIVVAAV GRPEMVPGDW IKEGATVIDV GINRIDAPEK
GEGKTRLVGD VHYESAAARA GAITPVPGGV GPMTIACLLA NTVTACCRAN NLSEPEGLTA
|
|---|
| |