| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2352 |
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| Symbol | |
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| ID | 4076471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2473735 |
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| End bp | 2474340 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007674 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_614346 |
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| Protein GI | 99082192 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.205488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTTC GAAACGGGCG CACCCACCTT TTCCGCCTTG TTTCACCCAC AGCCGCCATC
AGTGCCCTTG CACTGATGGC GGCATGTGTT TCGGGACAGG GACAGCCCCT CAAGCCGGTG
TCGCCAAATG GTGTCTGGGC CCCCGGCGTC GATCAGCGCG GCGAAAGCGT TCGGGCGCTG
GAGGTCGGGC ACAGGTTGCT GGCCGCGGAT CAGTACGAAC TGGCGATCGA GGCCTTCAAC
CGTGCCGCCC TCGAAGAGGG GCTCACAGCC GAAGTGCTGT CGGGTCTTGG CTCGGCCAAC
CTCGGGCTGG GACGGCTCGG ACAGGCGGAA ACGCTTTTGC GTCAAGCCGT TGACAAGGAA
CCCCAGTGGC CCGAAGCGCT CAACAACCTC GGCACCGTGC TCCTCGAGAA GGGGGAATAT
GCGGAGGCCG AACAGATCCT GCGCCGCGCC TATGCGCTCG ACAATGGCCA AAGTGACGCA
ATCCGCGATA ATTTGCGCCT CGCTCTCGAA AATCTTGACA ACACAGGGCA TACTGCCCCC
ACAGGCGATC AAGATAAACT GGTGCGAAAA GGCGGGGGCG TGTTCCTCAT CGAAACGACA
CCGTAG
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| Protein sequence | MQFRNGRTHL FRLVSPTAAI SALALMAACV SGQGQPLKPV SPNGVWAPGV DQRGESVRAL
EVGHRLLAAD QYELAIEAFN RAALEEGLTA EVLSGLGSAN LGLGRLGQAE TLLRQAVDKE
PQWPEALNNL GTVLLEKGEY AEAEQILRRA YALDNGQSDA IRDNLRLALE NLDNTGHTAP
TGDQDKLVRK GGGVFLIETT P
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