| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2340 |
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| Symbol | |
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| ID | 4078330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2462335 |
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| End bp | 2463039 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007662 |
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| Product | 3-oxoacid CoA-transferase, subunit A |
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| Protein accession | YP_614334 |
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| Protein GI | 99082180 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGG TTTACGGCTC TGCCGCTGAG GCCCTCGACG GGGTGCTGTT TGACGGCATG
ACAATTGCGG CAGGCGGCTT TGGCCTCTGC GGCATCCCGG AGTTGCTGCT TGAGGCGATC
AAAGACGCGG GCACCAAGGA TCTGACATTT GCGTCCAACA ACGCAGGCGT TGATGACTTT
GGCATTGGAA TCCTGCTGCA GACCAAGCAG GTCAAAAAGA TGATGTCGTC CTATGTGGGC
GAGAACGCGG AATTCATGCG TCAGTATCTC TCGGGCGAAC TGGAGCTGGA ATTCAACCCC
CAAGGCACGC TGGCCGAACG CATGCGCGCA GGCGGCTGCG GCATTCCCGG GTTTTACACC
AAGACCGGCG TCGGCACCCA GATCGCCGAA GGCAAGGAGG TCAAGGTCTT TGACGGCGAG
GAATACATCC TCGAGCGCGG CATCTTTGCG GATCTGTCCA TCGTCAAAGC CTGGAAGGCG
GATGAAACCG GCAACCTCGT GTTCCGCAAG ACCGCCCGCA ATTTCAATCC GCCCGCCGCG
ATGTGCGGCA AGATCTGTGT GGTCGAAGTG GAAGAGATCG TGCCCACCGG CAGCCTTGAT
CCCGATCACA TCCACCTGCC CGGCGTCTAC GTGCACCGCC TGATCCAGGG CGAACACGAA
AAACGTATCG AAAAAGTGAC CACCCGCCCG CGTGAGGAGG CTTGA
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| Protein sequence | MKKVYGSAAE ALDGVLFDGM TIAAGGFGLC GIPELLLEAI KDAGTKDLTF ASNNAGVDDF
GIGILLQTKQ VKKMMSSYVG ENAEFMRQYL SGELELEFNP QGTLAERMRA GGCGIPGFYT
KTGVGTQIAE GKEVKVFDGE EYILERGIFA DLSIVKAWKA DETGNLVFRK TARNFNPPAA
MCGKICVVEV EEIVPTGSLD PDHIHLPGVY VHRLIQGEHE KRIEKVTTRP REEA
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