| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2335 |
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| Symbol | |
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| ID | 4078325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2454126 |
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| End bp | 2455067 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007657 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_614329 |
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| Protein GI | 99082175 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.377934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACG CTAGCATCAA TGCAAGCATG ACCCGCGAAG AGGAGGCTTC CCTTGGCGAT
TACTTCGCGC TGCTGAAGCC GCGGGTGATG TCCCTTGTCG TGTTCACCGC CTTTGTTGGC
CTGATGGCTG CGCCCATCGG AGTGCATCCG GTGATCGGCT TCTGTGCGAT CCTGTTCATT
GCCATCGGCG GCGGGGCGTC TGGCGCGCTC AATATGTGGT GGGACGCCGA CATCGATCAG
GTGATGAAGC GCACCAAGGG CCGCCCGATC CCGGCTGGCA AAGTCGACAA GGGCGAAGCG
CTGAGTCTCG GCCTTGCGCT GTCGGGCCTG TCGGTGATCA TGCTGGCGCT TGCGACCAAC
GTGTTTGCAG GGGCGTTCTT GGCGTTCACC ATCTTCTTTT ACGTGGTGAT CTACACCATG
TGGCTCAAGC GGGCGACGCC GCAGAACATC GTCATCGGTG GCGCGGCAGG GGCGTTTCCG
CCTGTGATCG GCTGGATCGC GGCCACCGGC AGCATGTCGG TCGAGCCCTG GCTGATGTTT
GCACTGACCT TCCTGTGGAC GCCGCCGCAT TTCTGGGCGC TCGCGCTTTT TATGCGCAAT
GATTACGACA TGGCCGATGT GCCGATGCTG ACCGTGACCC ATGGGCGGCG CTCCACGCGC
AAGCACATCC TGGTCTACAC CGTAATTCTC GCGGCCTTTG CGCTGACCAC CGCCTTCACC
AGCGTCGGAG GGCCGATCTA TCTCACTACA GCTGTTGTGC TCAATGCGCT GTTCCTGAAA
GGCGCGGTCC AGATCTGGCG CCGCGATGAG GAGATCTGCG AGAGCGACAA CTTCAAGATC
GAACGCTCCT TCTTCAAACT GTCGCTGCTC TACCTCTTCC TCCACTTTGG CGCGATTCTC
GCCGAGGCGC TGTTGAAACC CTATGGGCTG GGAGGCTGGT AA
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| Protein sequence | MTDASINASM TREEEASLGD YFALLKPRVM SLVVFTAFVG LMAAPIGVHP VIGFCAILFI
AIGGGASGAL NMWWDADIDQ VMKRTKGRPI PAGKVDKGEA LSLGLALSGL SVIMLALATN
VFAGAFLAFT IFFYVVIYTM WLKRATPQNI VIGGAAGAFP PVIGWIAATG SMSVEPWLMF
ALTFLWTPPH FWALALFMRN DYDMADVPML TVTHGRRSTR KHILVYTVIL AAFALTTAFT
SVGGPIYLTT AVVLNALFLK GAVQIWRRDE EICESDNFKI ERSFFKLSLL YLFLHFGAIL
AEALLKPYGL GGW
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