| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2321 |
|---|
| Symbol | |
|---|
| ID | 4078311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2441144 |
|---|
| End bp | 2442754 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638007643 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_614315 |
|---|
| Protein GI | 99082161 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCG GCGTATTGGG CCTTTTGGCC AAGAATATCT CTCCTCCCAA TCTTTCCATC
ATGCAGGATG AGGGTTTTAC GGTGGCGCGT GTGCGCACCG AGCTGTTGTC CGGGCTGACG
GTGGCCCTGG CGCTGGTGCC GGAGGCGGTG GCCTTTGCCT TTGTGGCTGG GGTGCATCCT
CTGGTGGGGC TCTATGCGGC CTTTCTGGTG GGGCTGATCA CGGCGCTCAT CGGGGGGCGT
CCGGGCATGA TTTCGGGGGC GACCGGAGCG CTGGCAGTGG TGATGGTGGC GCTGGTGGCC
GAGCACGGGG TGGAGTATCT CTTTGCCACC GTGGTTTTGA TGGGCATCCT GCAGGTCATC
GCCGGTGTCA TGCATTGGGG CAAGTTCATC CGACTGGTGC CGCATCCGGT GATGCTTGGC
TTTGTGAACG GTCTGGCGAT CGTGATTTTC CTAGCGCAGC TTACGCAGTT CAAGCAACCC
GGCACCGGGG GCGAAGAATG GCTTGCCGGG CCGCAGCTTC TGATGATGCT GGGGCTTGTG
GTGCTGACCA TGGTGATCAT CTGGGGCATG CCCAAGCTGA CCAAGGTGAT CCCGGCGCCG
CTGGCGGGGA TCGGGATTAC AGCGATCATC GTGATCGCCT TTGGTCTTGA TGTGCCGCGC
GTGGGCGACA TGGCGTCCAT CGAGGGGGGC TTGCCAAGCT TTCACGTGCC GATGGTGCCG
TTCAACATGG AAACGCTGCA GATCATCCTG CCCTATGCGG TCATCCTGGC GGCGATTGGC
CTCATCGAGA GTCTTTTGAC CCTGAACCTT GTGGGCGAAA TCACCGGCAA GCGGGGCGGC
GCGAGCCAGG AGTGCATCGC GCAGGGGACA TCGAATATTG TTACCGGTTT CTTTGGCGGC
ATGGGCGGTT GTGCGATGAT TGGTCAGTCG ATGATCAACG TGAATTCGGG CGGGCGCACG
CGGATCGCGG CGATTGCGGC AGCCCTGTTT CTGTTGCTGT TCATCGTGGC GGCCTCTCCG
CTGATTGAAC AGATCCCGCT GGCAGCGCTC GTGGGCGTGA TGTTCATGGT GGTGATCGGG
ACATTTGCGT GGAACAGCTT CAAGATCATG ACCAAGGTAC CGCTGACGGA TGCCTTTGTG
ATCGTGCTGG TGACCGTGGT CACGGTGATG ACCGACCTTG CGATCGCTGT TGTGGTCGGG
GTCATCGTGT CGGCGCTGGC CTACGCGTGG AACAACGCGC GGCGCATTCA CGCGATCACC
CGCGACAGCG TGAGCGAGAA AGGCGCCAAG GTCTATGAGA TCCAGGGGCC GCTGTTCTTT
GGCTCGACCG ACGGGTTCAT CGAGCTCTTT GACGTAGAAA ACGATCCCGA CGTGGTGATC
GTGGACTTTG CGGCCTCGCG GGTTGTGGAT CAGTCGGCGC TGCAGGCCAT CGAGGCTGTG
GCCGGAAAAT ACGAGGCCGC TGGCAAGGCG CTGCAACTGC GTCACCTGAG CCGCGATTGT
CACGAGCTCC TGTCCAAGGC CGGGCATCTG ATGGTCGATA GCGACGATGA TCCGGAATAT
GGCCTCGCGG TGGACTACTC GGTCAAAACC GGGGTTCTGG GCGGTCACTA A
|
|---|
| Protein sequence | MTRGVLGLLA KNISPPNLSI MQDEGFTVAR VRTELLSGLT VALALVPEAV AFAFVAGVHP
LVGLYAAFLV GLITALIGGR PGMISGATGA LAVVMVALVA EHGVEYLFAT VVLMGILQVI
AGVMHWGKFI RLVPHPVMLG FVNGLAIVIF LAQLTQFKQP GTGGEEWLAG PQLLMMLGLV
VLTMVIIWGM PKLTKVIPAP LAGIGITAII VIAFGLDVPR VGDMASIEGG LPSFHVPMVP
FNMETLQIIL PYAVILAAIG LIESLLTLNL VGEITGKRGG ASQECIAQGT SNIVTGFFGG
MGGCAMIGQS MINVNSGGRT RIAAIAAALF LLLFIVAASP LIEQIPLAAL VGVMFMVVIG
TFAWNSFKIM TKVPLTDAFV IVLVTVVTVM TDLAIAVVVG VIVSALAYAW NNARRIHAIT
RDSVSEKGAK VYEIQGPLFF GSTDGFIELF DVENDPDVVI VDFAASRVVD QSALQAIEAV
AGKYEAAGKA LQLRHLSRDC HELLSKAGHL MVDSDDDPEY GLAVDYSVKT GVLGGH
|
|---|
| |