Gene TM1040_2293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2293 
Symbol 
ID4078477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2412068 
End bp2412541 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content60% 
IMG OID638007615 
Producthypothetical protein 
Protein accessionYP_614287 
Protein GI99082133 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGC GAACTCGGGT CAACGAGGCC CTCAAACAGG CGATGAAGGA CAAGGCGATG 
GAGCGTCTCT GCACTCTGCG CCTGATCAAT GCTGCCATCA AGGACCGTGA AATCGCTGCG
CGCGGTGACG GGGAAGAAGG CGGCATCGGC GATGAAGAGA TCCTCGCCAT CCTCGGCAAG
ATGACCAAGC AGCGCAAGGA AAGCGTGCGC GCCTATGAGG AGGGCGGACG GCTCGACCTC
GCCGAGCGCG AGATGAACGA GATTGAGATC ATTGAGGAAT TCCTGCCCAA ACAGCTCTCT
GAGGATGAGG TGTCGAACGC AGTGAAGGCC GCCGTTGATG AAACGGGTGC TGAATCCATC
CGCGACATGG GCAAGGTCAT GGGCGCGCTC AAGGCCAAAT ACACCGGCCA GATGGACTTT
GGCAAAGTGG GCCCGATGGT CAAGGATCAG CTCTGCTCGG CAGGGGGCTG CTGA
 
Protein sequence
MDTRTRVNEA LKQAMKDKAM ERLCTLRLIN AAIKDREIAA RGDGEEGGIG DEEILAILGK 
MTKQRKESVR AYEEGGRLDL AEREMNEIEI IEEFLPKQLS EDEVSNAVKA AVDETGAESI
RDMGKVMGAL KAKYTGQMDF GKVGPMVKDQ LCSAGGC