Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2293 |
Symbol | |
ID | 4078477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2412068 |
End bp | 2412541 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638007615 |
Product | hypothetical protein |
Protein accession | YP_614287 |
Protein GI | 99082133 |
COG category | [S] Function unknown |
COG ID | [COG1610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACGC GAACTCGGGT CAACGAGGCC CTCAAACAGG CGATGAAGGA CAAGGCGATG GAGCGTCTCT GCACTCTGCG CCTGATCAAT GCTGCCATCA AGGACCGTGA AATCGCTGCG CGCGGTGACG GGGAAGAAGG CGGCATCGGC GATGAAGAGA TCCTCGCCAT CCTCGGCAAG ATGACCAAGC AGCGCAAGGA AAGCGTGCGC GCCTATGAGG AGGGCGGACG GCTCGACCTC GCCGAGCGCG AGATGAACGA GATTGAGATC ATTGAGGAAT TCCTGCCCAA ACAGCTCTCT GAGGATGAGG TGTCGAACGC AGTGAAGGCC GCCGTTGATG AAACGGGTGC TGAATCCATC CGCGACATGG GCAAGGTCAT GGGCGCGCTC AAGGCCAAAT ACACCGGCCA GATGGACTTT GGCAAAGTGG GCCCGATGGT CAAGGATCAG CTCTGCTCGG CAGGGGGCTG CTGA
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Protein sequence | MDTRTRVNEA LKQAMKDKAM ERLCTLRLIN AAIKDREIAA RGDGEEGGIG DEEILAILGK MTKQRKESVR AYEEGGRLDL AEREMNEIEI IEEFLPKQLS EDEVSNAVKA AVDETGAESI RDMGKVMGAL KAKYTGQMDF GKVGPMVKDQ LCSAGGC
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