Gene TM1040_2284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2284 
Symbol 
ID4078468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2403547 
End bp2404638 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content59% 
IMG OID638007606 
Productubiquinol oxidase, subunit II 
Protein accessionYP_614278 
Protein GI99082124 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR01433] cytochrome o ubiquinol oxidase subunit II 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTATC TTCGTTTCCT GTGTTGTGCT TTGGCGTTTT TGACGCTGTC GGGCTGCAAT 
CTCGTATTGC TGTCCCCCTC CGGCGACATC GCCGCGCAGC AGGGCGACCT CATCGTTTAC
TCCACAGTCC TCATGCTCAT CGTCATCATT CCTGTGATGG CGCTGACGGT GTTTTTTGCC
TTCAAATACC GGGCAGAAAA TAAGGACGCC CGGTACGAGC CGGACTGGGA TCACTCCGTC
AGTCTCGAGA TCGTGGTGTG GTTTGTGCCG CTTGCGATCA TCATCTGTCT GGCAGGGCTG
ACCTGGGTGG CGACCCACCG GCTGGAGCCC TATGACGATC TGCGCCGCGT CTCCGAGACC
AAGCCCATCG ACCCCAATGT GGAACCCATG GAGGTTCAGG TGGTGGCGCT CGATTGGAAA
TGGCTGTTCA TCTATCCCGA ATACGGCGTG GCAACCGTCA ACGAGGCTGC AGCCATCGTG
GATCGCCCGG TGGAGTGGAA ACTCACGTCC TCTACGGTGA TGAACGCCTT CTACATCCCG
GAAATGGCCG GGATGATCTA TGCGATGGCC GGGATGGAGA CCGAGCTCAA CGCGGTGATC
AACGAACCCG GCACGTTTGA GGGTTTTTCG GCCAACTACA GCGGCAATGG GTTCTCTCAC
ATGCGGTTTG ATTTCATCGC CGAGGATGAA GCGGGCTTTG AGGCCTGGAT CGAAGAGGTC
CGTGCAAGCG GCATGACGCT TGATCAGGAC TCCTATGCGG TGCTCGAACA GCCCAGCGTA
GCCCATGAGG TCGAGTATTT CGGCGCGGTC GAAGACGGGC TCTGGGACAA GATCCTCAAC
ATGTGCGCTG GCCCCAATGC GCTGTGCCTC AACGACATGA TGATGGTTGA CGCGCTTGGC
GGTGGCGGTC TGGCGGGGCT CTACAATCGA GAGCTCTATC GCGGGATTTG CTCGGCAGAC
GACCCCGAAG CGCTGCTGGC GATGCTGCGG CCTGACATTC AGGAAGAACA GCAGCGCGAA
GACATTCTGC AGGCCATGAC CCTGACCTCA GGTGACCTGC TTCCCAATTC CAACACAACA
GAGGCGAACT GA
 
Protein sequence
MRYLRFLCCA LAFLTLSGCN LVLLSPSGDI AAQQGDLIVY STVLMLIVII PVMALTVFFA 
FKYRAENKDA RYEPDWDHSV SLEIVVWFVP LAIIICLAGL TWVATHRLEP YDDLRRVSET
KPIDPNVEPM EVQVVALDWK WLFIYPEYGV ATVNEAAAIV DRPVEWKLTS STVMNAFYIP
EMAGMIYAMA GMETELNAVI NEPGTFEGFS ANYSGNGFSH MRFDFIAEDE AGFEAWIEEV
RASGMTLDQD SYAVLEQPSV AHEVEYFGAV EDGLWDKILN MCAGPNALCL NDMMMVDALG
GGGLAGLYNR ELYRGICSAD DPEALLAMLR PDIQEEQQRE DILQAMTLTS GDLLPNSNTT
EAN