| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2282 |
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| Symbol | |
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| ID | 4078466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2400415 |
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| End bp | 2401998 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007604 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_614276 |
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| Protein GI | 99082122 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA AGACCGACAC CGTGAACCAG CAGGATCGCG TTCTCATTTT TGACACCACG
TTGCGCGATG GCGAGCAGAG CCCCGGCGCG ACCATGACCC ATGATGAAAA GCTCGAGATT
GCCGAGCTTC TGGACGATAT GGGTGTCGAC ATCATCGAGG CCGGTTTCCC GATTGCCTCG
GAGGGCGATT TCAAGGCCGT GAGCGAGATC GCGGAACGCT CCAAGAACTC TGTGATCTGT
GGCCTGGCGC GTGCGAATTT CAAGGACATC GACCGCTGCG CCGAAGCCGT GCGCAAGGCT
GCGAAGCCCC GCATCCACAC GTTTATCGGC ACGTCGCCGC TGCACCGCGC CATTCCCAAC
CTTACCATGG ATGAGATGGC CGAGCGCATC CACGACACCG TGACCCATGC GCGCAACCTC
GTGGACAATG TGCAATGGTC GCCGATGGAT GCCACGCGCA CCGAATGGGA TTACCTCTGC
CGGGTCATCG AGATCGCGAT CAAGGCGGGG GCGACTACCA TCAACATCCC TGACACGGTT
GGCTATACCG CGCCGCGCGA GAGCGCCGAC CTGATCCGGC GCCTGATTGA AACCGTGCCC
GGCGCTGACG AGATCATCTT TGCGACCCAT TGCCATAACG ACCTTGGCAT GGCGACCGCG
AACTCTTTGG CCGCAGTCGA GGCGGGCGCG CGCCAGATCG AATGCACGAT CAACGGCCTT
GGCGAGCGTG CGGGCAATAC CGCGCTCGAA GAGGTGGTGA TGGCAATGCG CGTGCGCAAC
GACATCATGC CGTTCCAGAC CGGGATCGAC ACCAAGAAGA TCATGCATAT CTCGCGCCGC
GTCGCCACGG TTTCGGGCTT TAACGTGCAG TTCAACAAGG CGATCGTCGG CAAGAATGCC
TTTGCCCACG AAAGCGGCAT CCACCAGGAT GGCATGCTCA AGAACAAGGA AACCTTCGAG
ATCATGCGCC CCGAAGACGT GGGCCTTGCT GGAACGTCGC TCCCCTTGGG CAAACACTCC
GGCCGCGCCG CGCTGCGCGA CAAGCTCTCG AGCCTCGGGT TTGAAATCGG AGACAACCAG
CTCAAGGATG TATTCGTGCG CTTCAAGGAG CTCGCGGACC GCAAGAAAGA GGTGTTCGAC
GACGACATCA TCGCGCTCAT GCGCACCAGC GGCGACGAGG ACGATCACCT GAAGCTGGTG
TCGATGAAAG TGGTCTGCGG CACCGGTGGT CCGGCGGAAT CCACCGTCGA GATGGAAGTT
GACGGCAAGG ACGTGACGGA AACCGCCGAG GGCGACGGAC CGGTGGATGC CACATTCAAG
GCGATCCGCA AGATCCACCC CAACGCCGCG CATCTGCAGC TTTATCAGGT GCACGCCGTG
ACCGAGGGCA CGGACGCGCA GGCAACCGTC TCTGTGCGCC TTGAAGAAGA CGGCGTGATC
GCCACCGGCG ACAGCGCCAA CACCGATACG GTTGTGGCCT CTGCGATGGC ATACATTGAC
GCGCTCAACC GCCTGATCGT GCGCCGCGAC AAGATGGGCG AAGGCGCGGA TTCGCGCGAG
ATTTCCTATA AAGACGTGGA CTGA
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| Protein sequence | MTSKTDTVNQ QDRVLIFDTT LRDGEQSPGA TMTHDEKLEI AELLDDMGVD IIEAGFPIAS
EGDFKAVSEI AERSKNSVIC GLARANFKDI DRCAEAVRKA AKPRIHTFIG TSPLHRAIPN
LTMDEMAERI HDTVTHARNL VDNVQWSPMD ATRTEWDYLC RVIEIAIKAG ATTINIPDTV
GYTAPRESAD LIRRLIETVP GADEIIFATH CHNDLGMATA NSLAAVEAGA RQIECTINGL
GERAGNTALE EVVMAMRVRN DIMPFQTGID TKKIMHISRR VATVSGFNVQ FNKAIVGKNA
FAHESGIHQD GMLKNKETFE IMRPEDVGLA GTSLPLGKHS GRAALRDKLS SLGFEIGDNQ
LKDVFVRFKE LADRKKEVFD DDIIALMRTS GDEDDHLKLV SMKVVCGTGG PAESTVEMEV
DGKDVTETAE GDGPVDATFK AIRKIHPNAA HLQLYQVHAV TEGTDAQATV SVRLEEDGVI
ATGDSANTDT VVASAMAYID ALNRLIVRRD KMGEGADSRE ISYKDVD
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