| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2277 |
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| Symbol | |
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| ID | 4078461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2392715 |
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| End bp | 2394016 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007599 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_614271 |
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| Protein GI | 99082117 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.811789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGAC CTCAGCTGCC TCACTTCAAT TCGGACCGCG TGCTGCCCAA AGCGGTTGAT
GTCGTCATCA TCGGTGGCGG TATCGTTGGT GCATCGACCG CGCTGGAGCT CGCAGAGCGG
GGCCATTCCG TGCTCCTGTG CGAGAAAGGC CAGATCGCGG GGGAGCAGAG CTCGCGCAAC
TGGGGCTGGG TTCGCATGTC CCAGCGCGAT CCCCGCGAAA TGGAACTGAT GACCCACTCC
CAGCGCATCT GGGAAGGTCT GGATATGCGT ACAGGCTACG CCACCGGCTA TACCAAATGC
GGCATCATGT TCACGGCCCA CACCCGCAAA CGCGAGGCGG AGCTCTCGGC GTGGTCAGAG
CATCTGAAGG CGATTGGTGG CGAGGGGCAC ATGTTGCGCG GCGAGTCACT GGAACAGCTG
ACGCCGGGCT ATGGTCACCG AATCCGCGCC GGGTTCTACA CCCCACAGGA TGGCTGCGCC
GAGCCGCAGA TGGCCACGCA TGCAATCGCT TCCGCTGCGC GGGATAAGGG CGCGGTGGTC
ATCACCGGCT GCGCGGTGCG ACGGCTGGAT GTGGAGGCGG GGCGCATCCG GGGGGTCATC
ACCGAAAAGG GCCGCGTCAA CGCCACCGCC GTGGTGGTGG CAGGCGGTGC GTGGTCACGC
TTGTTCCTGC GCAACGAGGG CCTGTTCCTG CCCCAGCTCA AGGTCCTCAA CTCCGTGATG
CGCCTCTCCC CGGTCAAGGG TGTGCCGGAA ACGGCACTCT GGGCGGCTGG TTTTGGCCTG
CGCAAACGTA TGGATGGGGG CTACACGGTG GCCTCGGGCG GCGAGAACAC CTTTGACATC
GTGCCCGACA CCTTTCGGAT CGGTCATCGC TTTATCCCGG CCTTTCTGCG TGATGTGACC
GCGCTGCGCT TTCGCGTCTC AGACCGCTGG CGCATCGAGA GCGCCGAGGC CCGCCCCTGG
AGCGGTCAGG ATCGCTCTCC GTTTGAAGAG ACCCGCGTGC TGGACCCGCA ACCTTCGCAA
AAAGCGCTGC GTCGCGGTCT TGCGGCGGTT CGAGATGCCT TCCCGGCGCT GGAAAAGGCC
GATGTGACCC AAAGCTGGGG CGGGCTGATC GACGTGACCC CGGACGAGAT CCCGGTGATT
TCCGAAGTGA TCTCCCGTCC GGGGCTGTTT GTGTCCACCG GCTACAGCGG ACATGGCTTT
GGCCTTGGCC CCGGGGCCGG TCGGTTGACG GCGGATCTGG TGACGGGGGA CGCGCCCATC
GTGGATCCGC GCCCCTTCCG CCTCAGTCGT TTTGGCGCTT AG
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| Protein sequence | MPGPQLPHFN SDRVLPKAVD VVIIGGGIVG ASTALELAER GHSVLLCEKG QIAGEQSSRN
WGWVRMSQRD PREMELMTHS QRIWEGLDMR TGYATGYTKC GIMFTAHTRK REAELSAWSE
HLKAIGGEGH MLRGESLEQL TPGYGHRIRA GFYTPQDGCA EPQMATHAIA SAARDKGAVV
ITGCAVRRLD VEAGRIRGVI TEKGRVNATA VVVAGGAWSR LFLRNEGLFL PQLKVLNSVM
RLSPVKGVPE TALWAAGFGL RKRMDGGYTV ASGGENTFDI VPDTFRIGHR FIPAFLRDVT
ALRFRVSDRW RIESAEARPW SGQDRSPFEE TRVLDPQPSQ KALRRGLAAV RDAFPALEKA
DVTQSWGGLI DVTPDEIPVI SEVISRPGLF VSTGYSGHGF GLGPGAGRLT ADLVTGDAPI
VDPRPFRLSR FGA
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