| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2276 |
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| Symbol | |
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| ID | 4078460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2391780 |
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| End bp | 2392718 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007598 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_614270 |
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| Protein GI | 99082116 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.759602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTGA AGCTATCTCG CCGCGCGGCT CTTGCCGGTG TTGCGGCTGC CCCGATCGCC
GCGGCGGTTG CGGCCCCTGC CCGCGCGGCC GGCCATGAAG CTGCCAAGGC GCCTCTGCAT
GCGCGTGCGT TCAAGGTGGG CGACTACACG GTTCACAGTC TGCTGGCGGG CAGCACCGGT
CGCGACGGTG TGAAGGATAT CTTTGGCGGC GGAGCCTCTG ATGAGGCGTT TTCCGAAGTC
GCGGCAGAGA ATTTCATCTC TGACACCAGC GCTCAGTTTT ACTTTACGCC GACACTCGTG
GACACCGGCT CGGAGAAGAT CCTCTTTGAC ACCGGCCTCA ATGCAGGTGG GATCACAAAA
GCGCTGGCGG ATGCGGGCGT GACGCCGGAA GAAGTGGATG TGGTGGTGCT GACCCATATG
CATGGCGACC ACATCGGCGG CATGACCGAC GACAGCGGCG CGGCGACCTT TGCCAATGCG
CGCTATGTGA CGGCAGCGGC GGAATATGAC CACTGGACCG CAATGCCCGA AGGCAATGGC
GGCGCGGATC GGGTGCGCGC CAAGGTGGCA CCGCAGGCCG AGAAGATGAG CTTTATCGAC
GATGGTGGGG CGGTGGCCTC GGGCGTGACC GGGATGGCAG CCTTTGGGCA TACGCCGGGC
CATATGGTCT ATATGATCGA GAGCGCCGGG CAGCAGCTGC TGCTGACGGC CGATCTGGCC
AATCACTATG TGTTCCCCTT TGCCCATCCC GAGTGGCAGA CCAGCTTTGA CACCGACAAG
GATGCGGCCT CGGCCACGCG GCGGCGGGTG CTGGAAATGC TCGCTGACAG CCGCACGCCA
ATGATCGGCT ATCACATGCC CTTCCCTGCC GCCGGCTATG TCGAGCGGCG CGGCGAAGGG
TTCCGTTTTG TGCCGGTCAG CTATCAGATG ATGGGCTAA
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| Protein sequence | MTLKLSRRAA LAGVAAAPIA AAVAAPARAA GHEAAKAPLH ARAFKVGDYT VHSLLAGSTG
RDGVKDIFGG GASDEAFSEV AAENFISDTS AQFYFTPTLV DTGSEKILFD TGLNAGGITK
ALADAGVTPE EVDVVVLTHM HGDHIGGMTD DSGAATFANA RYVTAAAEYD HWTAMPEGNG
GADRVRAKVA PQAEKMSFID DGGAVASGVT GMAAFGHTPG HMVYMIESAG QQLLLTADLA
NHYVFPFAHP EWQTSFDTDK DAASATRRRV LEMLADSRTP MIGYHMPFPA AGYVERRGEG
FRFVPVSYQM MG
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