| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2274 |
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| Symbol | |
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| ID | 4078458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2388963 |
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| End bp | 2390147 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007596 |
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| Product | hypothetical protein |
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| Protein accession | YP_614268 |
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| Protein GI | 99082114 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4325] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.433332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.375315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGC GCAGCCTCCT GCTGCTCCGG CGCATCACGC GCCAGCTCTG GTTTCGGGTG
GTTGCGATTT CCCTGTTCTC GCTTCTGGCG CTGGCGATCG CCCCATTGCT AGCGCCGATC
CTGCCGCCAG CCTGGGAGGA CCGGTTTGGT CGCGAGGCGG TTCTGCCGGT GTTGACGATC
CTTGCCTCCG GCATGCTGGC GGTGACGACG TTTTCGCTCA ATGTCATGGT CAGCGCCTAC
CGCACCGCCT CCAGCATGGC GACGCCGCGC GTCTACCGGT TGTTGCTCGA GGACACCGTC
ACCCAGAGTG TACTGGCGAC CTTTACCGGC GGTTTTGTCT ATTCGCTGAG TGCCGTGATC
CTGTTTCGCG CCGGGATCTA TCCGCCGGGA TCGGCCTTTG TGGTCTTTGT GATGACGGCG
CTGGTGGTGA TGCTGATCGT TCTGGCAATC CTGCGCTGGA TCGATCACCT CTCGGATCTG
GGCAGCATGG ACCACACGCT GCGCCTGATC GAAAGCCGCA GCTGCAGCAG CCTGCGCGCG
CGCAAAGAGA CCCCCTGCCT TGGCGGCTGC TGTCTGAAGA CAGAGCCCCC ATCGAGTGCC
AGCCCCATTC CCGCAAGCCA GAGCGGATTT GTGCGTTTTG TCGATATGGC CGCGCTCAAC
CGGCGCGCCA AGGAGGCCGG TGTCACGCTC TACCTGACCC GCCTGCCCGG CGAATTTGTC
CTGCGCGGCC GCCCGGTGGC CATGGCCGAA GGGGCCGATG AGGCCTTCTG TAAAGAGGCA
AGCGGCCTCA TTGATGTCGG CGATGTGCGC AGTTTCGAAC AAGACCCGAC CTTTGGGCTG
ACGCTCCTGG CGGAAACCGC GCAACGCGCC CTTTCGCCCG GGGTCAATGA TCCGGGCACC
GCCTATGAGG TCATGGGTCG TCTGACGCGT CTGTTGTGGG AGAACCTGCC CGAGGACTCC
GAGGCCACAA AATCAGACGC GGATTTTCCA CATATTCACC TGCCGCCGGT GACTGCATCC
GCCTTGCTCA AGGCCAGCTT CCCGCCGATC GCGCTCTATG CCGGGGATGC GCCAGAAGTC
ATGGATTGGA TGCAGACCTC GCTCAAGGCG CTTGAGCATC ACCCCAATGC GGCCATGACG
CGGGCTGCGC AAGAGATGCG GCAGGACTAC TTTGAGAATT CATAA
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| Protein sequence | MISRSLLLLR RITRQLWFRV VAISLFSLLA LAIAPLLAPI LPPAWEDRFG REAVLPVLTI
LASGMLAVTT FSLNVMVSAY RTASSMATPR VYRLLLEDTV TQSVLATFTG GFVYSLSAVI
LFRAGIYPPG SAFVVFVMTA LVVMLIVLAI LRWIDHLSDL GSMDHTLRLI ESRSCSSLRA
RKETPCLGGC CLKTEPPSSA SPIPASQSGF VRFVDMAALN RRAKEAGVTL YLTRLPGEFV
LRGRPVAMAE GADEAFCKEA SGLIDVGDVR SFEQDPTFGL TLLAETAQRA LSPGVNDPGT
AYEVMGRLTR LLWENLPEDS EATKSDADFP HIHLPPVTAS ALLKASFPPI ALYAGDAPEV
MDWMQTSLKA LEHHPNAAMT RAAQEMRQDY FENS
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