| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2269 |
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| Symbol | |
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| ID | 4078453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2383855 |
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| End bp | 2384532 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007591 |
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| Product | lipolytic enzyme, G-D-S-L |
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| Protein accession | YP_614263 |
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| Protein GI | 99082109 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00077116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.478679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGT TTCTAAAGCA AATTGTGGTC AGTTTGGTGA GCATTCCATT GCTCCTGGGC
GTGGCGCAGG CGGAGCCCGT GCGGATCACC GCTTTTGGCG ATAGCTTGGT GCAGGGCTAT
GGGCTGCCCC AGGGCGAGGG TCTGGTGGCG CAGCTGCGGG ACTGGTTCGC GGTGGAGGGC
TTTGATGTCG CGCTGACCAA TGCGGGGGTC TCTGGCGACA CCACCGCCGG CGGCGCGGCG
CGCATCGATT GGACCCTTGC GGAAACCCCG GACGCCATGA TCGTGCTCCT GGGCGGAAAT
GACCTGCTGC GCGGACTTCC CCCCGAAGAC ACCCGCGCCA ATCTCAGCCG GATCATTGAG
GCCGCGCGCG GGGCAGGGGC CGAAGTGCTG CTCATCGGGA TGCAGGCGCC GGGCAATTAT
GGCGCCGACT ACAAGGCCGC TTTTGACAGT ATCTATCCGG ATCTGACCGC GACGCATGAT
CTTGTGCTGC ACCCGTTTGC CTTTGCCGGG ATGGCCGCAG AAGCAGGAGA GGATCCGGCC
CAGATGGGCG CCTACATGCA GGCGGATGGC ATCCATCCCA ATGCGCGTGG TGTCGCCTTG
AATATCAAGG CGATGGAGCC CGCCCTTCAC GCGCTGATGG CGCGGCTTTC ACAACCTGAG
GACAGCGCCA ACAACTAG
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| Protein sequence | MRKFLKQIVV SLVSIPLLLG VAQAEPVRIT AFGDSLVQGY GLPQGEGLVA QLRDWFAVEG
FDVALTNAGV SGDTTAGGAA RIDWTLAETP DAMIVLLGGN DLLRGLPPED TRANLSRIIE
AARGAGAEVL LIGMQAPGNY GADYKAAFDS IYPDLTATHD LVLHPFAFAG MAAEAGEDPA
QMGAYMQADG IHPNARGVAL NIKAMEPALH ALMARLSQPE DSANN
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