Gene TM1040_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2245 
Symbol 
ID4077312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2359730 
End bp2360392 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID638007567 
Productglutathione S-transferase-like 
Protein accessionYP_614239 
Protein GI99082085 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.556118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG AATTTGCCTC CTCCTCCGCA CCGATCAAAC TCTATCGCCA CCCGCTCTCG 
GGGCATTGTC ACCGGGTCGA GATGATGCTC TCGATCCTCG ATCTGCCCTA TGAGTTGGTC
GACCTCGACC TGCTGCAGGG CGCGCATAAG GCGCCCGCGT TCCTGGATCT CAACCCGTTT
GGGCAGGTTC CAGTTCTGGA CGACAACGGC ACCATCGTCA GCGATTCCAA TGCGATCCTT
GTCTATCTTG TCGAGGCCTA CGGCAAAGAG ACGGGTTGGT TGCCCCGCGC GCCCGGTGTG
GCCGCCGCAG TTCAGCGCTG GCTGTCGCTT ACGGTATCGC ATCTGGCAAC CGGTCCCGCG
CGGGCGCGTT GGCGGACCCT GACCGGCGCG AGCGACACGC CGGAAACGGA GACAGCGCGT
GCCATCAGCC ATGCCTTTCT GGAGCAGATG GAAGGTCTGA TCTCGGGTCA GCACTACCTG
GCAGGAGAGG CGCCTACGAT CGCGGATGTG TCTGCCTACG CCTATATCGC ACACGCGCCC
GAGGGAGGTG TGAGCCTTGC GGCCTATCCA AAGGTACGGG CGTGGATCGA TCGGGTCGAA
GCGCTTCAGG GGTTTGTGCC GATGCAGGCC TCCCCGCTGC CAGAGCTTGC GCGAGGCGCC
TGA
 
Protein sequence
MNAEFASSSA PIKLYRHPLS GHCHRVEMML SILDLPYELV DLDLLQGAHK APAFLDLNPF 
GQVPVLDDNG TIVSDSNAIL VYLVEAYGKE TGWLPRAPGV AAAVQRWLSL TVSHLATGPA
RARWRTLTGA SDTPETETAR AISHAFLEQM EGLISGQHYL AGEAPTIADV SAYAYIAHAP
EGGVSLAAYP KVRAWIDRVE ALQGFVPMQA SPLPELARGA