Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2245 |
Symbol | |
ID | 4077312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2359730 |
End bp | 2360392 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638007567 |
Product | glutathione S-transferase-like |
Protein accession | YP_614239 |
Protein GI | 99082085 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.556118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCG AATTTGCCTC CTCCTCCGCA CCGATCAAAC TCTATCGCCA CCCGCTCTCG GGGCATTGTC ACCGGGTCGA GATGATGCTC TCGATCCTCG ATCTGCCCTA TGAGTTGGTC GACCTCGACC TGCTGCAGGG CGCGCATAAG GCGCCCGCGT TCCTGGATCT CAACCCGTTT GGGCAGGTTC CAGTTCTGGA CGACAACGGC ACCATCGTCA GCGATTCCAA TGCGATCCTT GTCTATCTTG TCGAGGCCTA CGGCAAAGAG ACGGGTTGGT TGCCCCGCGC GCCCGGTGTG GCCGCCGCAG TTCAGCGCTG GCTGTCGCTT ACGGTATCGC ATCTGGCAAC CGGTCCCGCG CGGGCGCGTT GGCGGACCCT GACCGGCGCG AGCGACACGC CGGAAACGGA GACAGCGCGT GCCATCAGCC ATGCCTTTCT GGAGCAGATG GAAGGTCTGA TCTCGGGTCA GCACTACCTG GCAGGAGAGG CGCCTACGAT CGCGGATGTG TCTGCCTACG CCTATATCGC ACACGCGCCC GAGGGAGGTG TGAGCCTTGC GGCCTATCCA AAGGTACGGG CGTGGATCGA TCGGGTCGAA GCGCTTCAGG GGTTTGTGCC GATGCAGGCC TCCCCGCTGC CAGAGCTTGC GCGAGGCGCC TGA
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Protein sequence | MNAEFASSSA PIKLYRHPLS GHCHRVEMML SILDLPYELV DLDLLQGAHK APAFLDLNPF GQVPVLDDNG TIVSDSNAIL VYLVEAYGKE TGWLPRAPGV AAAVQRWLSL TVSHLATGPA RARWRTLTGA SDTPETETAR AISHAFLEQM EGLISGQHYL AGEAPTIADV SAYAYIAHAP EGGVSLAAYP KVRAWIDRVE ALQGFVPMQA SPLPELARGA
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