| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2244 |
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| Symbol | |
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| ID | 4077311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2358787 |
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| End bp | 2359728 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007566 |
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| Product | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
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| Protein accession | YP_614238 |
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| Protein GI | 99082084 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.856574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCT CTGAGCAGGT TTTCCACGCA GGCGAATTGA TCCTGCAAAA CCGCGCCGGT
GTCGCGCCAA GCTATCGCGA GCGGGTGGCC CATGCCATCC GCCCGCAGAT GCCTCAACAG
CATCGCGATT TCTTTGAGAG CCTGCCGGTG CTCTTTCTGG GTTTGCTTGA CGCGCGTGGG
CGAGTCTGGG CGACACCTGC GGTGGGTGAA GTTGGCTTTC TGCGTTCGCG CGACCCCGGT
CATCTGGCGG TCGGGGCGCG CCCAGTGTTG GGCGAAACGC TTTGGCTGGA TGTTCGCGCC
GGGGCCAAGG TGGGCGCGGT GGGCATGGAA ATGGCCAGTC GCCGCCGCAA CCGCATGAAC
GGCACCATCA CTGCGGTCAA TGGAGAAGGA TTTGAGATCG CGGTGGACCT GAGCTTTGGC
AATTGCCCGC AGTATATCCA GACCCGCGAT CTCGTATGGC CCGCCAATCC GCCAGCGCCC
GAGGCCGTGG CGCTGCCCGA TTGGGAGTCG CAAAGCCGCG CGCTGGTCGC GCAGGCCGAT
ACCTTTTTTA TCGCGTCGCG CGCGGCCGAG ATGTCAGCGC GCCCCATCGA TGGGGTTGAT
GCCTCGCACC GTGGCGGGCG GCCCGGTTTC CTGACGATCA ACGACGACAG CTCGCTCTCC
TTTCCCGATT TTGCCGGAAA CCGGTTTTTC AACACGCTCG GCAACATTGA GGCCGATGGG
CGCGTAGGGC TTTTCATCCC CGACTTCAAA AGCGGTGCGG GGATCTTTGT CACCGGTCTG
GCGACGGTCG ACTGGCGCCC TGACCGCGTG TCCCACTTCA AAGGGGCGGA GCGGATCGTC
GACGTGCAGC CAGAGGAAAT CTGGTACTGC ACGCATGCTC TGCCCGGGCC TGCGCCCCTG
GTCAGCACAT GGCCACTGCT TGCGGAAACA GGCGTCTGGT AG
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| Protein sequence | MSRSEQVFHA GELILQNRAG VAPSYRERVA HAIRPQMPQQ HRDFFESLPV LFLGLLDARG
RVWATPAVGE VGFLRSRDPG HLAVGARPVL GETLWLDVRA GAKVGAVGME MASRRRNRMN
GTITAVNGEG FEIAVDLSFG NCPQYIQTRD LVWPANPPAP EAVALPDWES QSRALVAQAD
TFFIASRAAE MSARPIDGVD ASHRGGRPGF LTINDDSSLS FPDFAGNRFF NTLGNIEADG
RVGLFIPDFK SGAGIFVTGL ATVDWRPDRV SHFKGAERIV DVQPEEIWYC THALPGPAPL
VSTWPLLAET GVW
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