| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2243 |
|---|
| Symbol | |
|---|
| ID | 4077310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2356185 |
|---|
| End bp | 2358479 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638007565 |
|---|
| Product | salicylyl-CoA 5-hydroxylase |
|---|
| Protein accession | YP_614237 |
|---|
| Protein GI | 99082083 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0946349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTG CATGCTTGGG AGGGGGGCCA GCGGGCCTGT ATTTCGGGAT CTCGATGAAG
CTGCGTGATC CCAGCCATGA GGTCACGGTG ATCGAACGCA ATCGGGCCGA TGACACCTTT
GGCTGGGGCG TGGTGCTCTC GGATGAGACG CTCGACAATC TGGCAGCCAA TGACGCCAAG
AGCGCCGAGT CGATCCGGTC TCATTTTGCC TATTGGGATG ATGTCGCGCT TCTGTTCAAA
GGCACGCGGC AGGTGTCCTC TGGTCATGGG TTCTGCGGCA TCGGGCGCAA GAAGCTGCTG
ATCCTTCTGC AGGAGCGCGC CCGTGAACTG GGCGTCAAGA TGCAGTTCGA AACCGAAGTG
CAAAGCGCCG AGGACTATCG CAAGGATTAC GATCTTGTGG TCGCCAGTGA CGGGCTCAAT
TCGCGCACAC GCAGCCTGTA TGCCGACACC TTCAAGCCGG ATGTGGACAC GCGGCTTTGT
AATTTTGTTT GGCTTGGCAC CCATCAGACC TTCAAGGATG CGTTCACGTT TATCTTTGAG
GAAACCGAGC ACGGCTGGGT CTGGGCGCAT GCCTACCAGT TCGACGACGA CACCGCGACC
TTCATCGTGG AATGCACGCA AGAGACCTTT GACGCCTTTG GTTTTGGCTC CATGAGCCAG
CAGGAAAGCA TCAAGACCTG CGAAGAAATC TTCAAGGATC ATCTGGGCGG CCATGCGCTG
ATGACCAATG CCAACCATAT TCGCGGCTCC GCCTGGATCC GCTTCCCGCG GGTTTTGTGC
GAAAAATGGA GTCACGAGAA TGTGGTCCTG ATGGGCGACG CGGCCGCGAC GGCGCATTTC
TCGATTGGGT CAGGGTCCAA GTTGGCGCTG GAATCCGCGA TTGCGCTGGC CGATCTGCTG
CATGAAAAGC CTGATCTGCA AAGCGCCTTT GACGAATACG AAGACCAGCG CCGTCTTGAG
GTGTTGCGCC TGCAGTCTGC GGCACGCAAT TCGATGGAGT GGTTCGAGCG GGTGGAGCGC
TATCTGGATC TTGATCCGGT GCAGCTGAAT TACTCGATGC TGACTCGCAG TCAGCGGATC
AGCCACGAAA ACCTGCGCGA ACGGGACAAG GACTGGCTTG AGAGCGCGGA GCGCTGGTTC
ATGGATCAGG CGGGGGCGCC CAAGGATGCG CCGCTGCGGG CGCCGATGTT TGCCCCCTTC
CGCCTGCGCG AGATGGACCT CAAGAGCCGC ATCGTCGTTT CGCCCATGGC GCAGTACAAG
GCCAAGGATG GCAGCCCGAC CGACTGGCAT CTGGTGCATT ACGGCGAACG CGCCAAAGGC
GGCGCGGGGC TGGTCTACAC CGAGATGACC TGTGTATCGC CAGAGGGCCG GATTACCCCC
GGCTGTCCGG GGCTCTATGC GCCGGAGCAT GAGGCCGCAT GGTCGCGGAT CACCGATTTT
GTGCATGCCG AAACCGACGC CAAGATCTGC TGCCAGATCG GCCACTCGGG ACGCAAAGGC
TCCACCCAGC TTGGTTGGGA CGAGATGGAT GCACCGCTGC CAGAGGGCAA CTGGGATATC
GTCAGCGCCT CTGCGATCCC GTGGTCTGGG CAGAACGCCA CCCCGCGCGA AATCACCCGC
GCCGAGATGG ACGAGGTGCG CGATCAATTT GTGCGCGCGG CTCAGATGGC GGATCGTGCG
GGCTTTGACA TGATCGAGCT GCACGCAGCC CATGGCTATC TGATCTCGTC GTTCCTGTCG
CCGGTCTCGA ACCAGCGCGG CGATGACTAT GGCGGCAGCC TTGAAAACCG CCTGCGCTAT
CCGCTCGAGG TCTTTGCCGC GATGCGCGCG GTCTGGCCCG AAGGCAAGCC GATGTCGGTG
CGGATCTCCG CCAATGACTG GGTGGGCGAG GATGGCGTCA CCCCGGACGA AGCCGTCCAG
ATCGCGCGTG CCTTTTGGGA GGCCGGTGCG GATCTGATCG ACGTGTCTGC CGGTCAGACC
ACCACCGAGG CCAAACCCGT CTACGGCCGC ATGTTCCAGA CGCCGTTTTC GGATCAGATC
CGCAACGAGG CGGGCATCTG TACCATGGCT GTGGGCAATA TCTTCGAGGC CGATCATGCC
AATTCGATCC TGATGGCAGG CCGCGCGGAT CTGGTGGCCG TGGGCCGCCC GCATCTCTCG
GATCCGTATT GGACCCTTCA CGAGGGCAGC AAGATCGGTG ATCGTGCAGC CCCCGACTGG
CCGCTGCCCT ATCTGGCGGG GCGCGATCAG AGCTGGCGTC TTGCGGACAA AGAAGCGGAG
ACCCTGCGCG CATGA
|
|---|
| Protein sequence | MRIACLGGGP AGLYFGISMK LRDPSHEVTV IERNRADDTF GWGVVLSDET LDNLAANDAK
SAESIRSHFA YWDDVALLFK GTRQVSSGHG FCGIGRKKLL ILLQERAREL GVKMQFETEV
QSAEDYRKDY DLVVASDGLN SRTRSLYADT FKPDVDTRLC NFVWLGTHQT FKDAFTFIFE
ETEHGWVWAH AYQFDDDTAT FIVECTQETF DAFGFGSMSQ QESIKTCEEI FKDHLGGHAL
MTNANHIRGS AWIRFPRVLC EKWSHENVVL MGDAAATAHF SIGSGSKLAL ESAIALADLL
HEKPDLQSAF DEYEDQRRLE VLRLQSAARN SMEWFERVER YLDLDPVQLN YSMLTRSQRI
SHENLRERDK DWLESAERWF MDQAGAPKDA PLRAPMFAPF RLREMDLKSR IVVSPMAQYK
AKDGSPTDWH LVHYGERAKG GAGLVYTEMT CVSPEGRITP GCPGLYAPEH EAAWSRITDF
VHAETDAKIC CQIGHSGRKG STQLGWDEMD APLPEGNWDI VSASAIPWSG QNATPREITR
AEMDEVRDQF VRAAQMADRA GFDMIELHAA HGYLISSFLS PVSNQRGDDY GGSLENRLRY
PLEVFAAMRA VWPEGKPMSV RISANDWVGE DGVTPDEAVQ IARAFWEAGA DLIDVSAGQT
TTEAKPVYGR MFQTPFSDQI RNEAGICTMA VGNIFEADHA NSILMAGRAD LVAVGRPHLS
DPYWTLHEGS KIGDRAAPDW PLPYLAGRDQ SWRLADKEAE TLRA
|
|---|
| |