Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2241 |
Symbol | |
ID | 4077308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2354957 |
End bp | 2355442 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638007563 |
Product | MarR family transcriptional regulator |
Protein accession | YP_614235 |
Protein GI | 99082081 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.117879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCA CCGCAGCGCA AGCTGATCTC GGCGACACGG CCTCCAAGGC GCGGCTGCGT CTGTGGCTGA AGCTCTTGAA GACGTCAGGC AGTATCGAGT CCGAGCTGCG CCGTCGCTTG CGCGATCGCC ACAACACCAC GCTGCCGCGG TTTGACGTGA TGTCAGCGCT TTCGCGCAAT CCCGAAGGGC TCAAGATGAG CCAGCTCTCG CAATTTCTGC GCGTGTCCAA CGGCAATGTG ACCGGCATCG TGGACCGGCT GACCGAGGAC GGTCTGGCGC TGCGGGTTGC GGTCCCCGGC GACCGTCGCG CCCAGGTGGC GCGGCTGACC CCTGCAGGAG AGGCCGAGTT TGACCGCCTC GCCGCCGAGC ATGAGGCCTG GATCGGCGAG ATGATGGCGG GGCTTGGCGC AGATGAAATC ACCGAAATGA GCGCGCTTCT GGACCAGATC CAGCCGGTTG CGGCGCCCCA AGAAGACAAA GGATGA
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Protein sequence | MSGTAAQADL GDTASKARLR LWLKLLKTSG SIESELRRRL RDRHNTTLPR FDVMSALSRN PEGLKMSQLS QFLRVSNGNV TGIVDRLTED GLALRVAVPG DRRAQVARLT PAGEAEFDRL AAEHEAWIGE MMAGLGADEI TEMSALLDQI QPVAAPQEDK G
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