Gene TM1040_2241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2241 
Symbol 
ID4077308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2354957 
End bp2355442 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content65% 
IMG OID638007563 
ProductMarR family transcriptional regulator 
Protein accessionYP_614235 
Protein GI99082081 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.117879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA CCGCAGCGCA AGCTGATCTC GGCGACACGG CCTCCAAGGC GCGGCTGCGT 
CTGTGGCTGA AGCTCTTGAA GACGTCAGGC AGTATCGAGT CCGAGCTGCG CCGTCGCTTG
CGCGATCGCC ACAACACCAC GCTGCCGCGG TTTGACGTGA TGTCAGCGCT TTCGCGCAAT
CCCGAAGGGC TCAAGATGAG CCAGCTCTCG CAATTTCTGC GCGTGTCCAA CGGCAATGTG
ACCGGCATCG TGGACCGGCT GACCGAGGAC GGTCTGGCGC TGCGGGTTGC GGTCCCCGGC
GACCGTCGCG CCCAGGTGGC GCGGCTGACC CCTGCAGGAG AGGCCGAGTT TGACCGCCTC
GCCGCCGAGC ATGAGGCCTG GATCGGCGAG ATGATGGCGG GGCTTGGCGC AGATGAAATC
ACCGAAATGA GCGCGCTTCT GGACCAGATC CAGCCGGTTG CGGCGCCCCA AGAAGACAAA
GGATGA
 
Protein sequence
MSGTAAQADL GDTASKARLR LWLKLLKTSG SIESELRRRL RDRHNTTLPR FDVMSALSRN 
PEGLKMSQLS QFLRVSNGNV TGIVDRLTED GLALRVAVPG DRRAQVARLT PAGEAEFDRL
AAEHEAWIGE MMAGLGADEI TEMSALLDQI QPVAAPQEDK G