| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2236 |
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| Symbol | |
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| ID | 4077303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2349167 |
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| End bp | 2350087 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007558 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_614230 |
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| Protein GI | 99082076 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.428427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGA TACTTATCAT CGAGCAGGTG CTGAACGGGC TTCAGTCCGG CGTCATGCTC
TTTCTCATGG CGGCGGGGCT GACGCTGATT TTTGGGGTCA TGGGCCTCAT CAATCTTGCC
CATGGCTCGC TCTATATGGT TGGGGCCTTT GCCGCGGCGG CCGTGGCGGG CGTCACGGGG
TCCTTCGTGC TGGCGCTTAT CGCGGCGCTT GCGGCGGCGG CGCTTGCGGG GGCTGTGATC
GAGGTTGCGG TGATCCGCAG GCTCTATGAC AGCGATCACC TCGATCAGGT GCTGGCGACC
TTTGCGCTCA TTCTGATTTT CTCCGAAGGC ACGCGCTGGG TTTTTGGCTC TTTTCCGCTG
TTTCTGGACA TTCCCGATGC CTTGTCGGGG CCGGTTACCC TGCCCGGAGG TATCCAGTAT
CCGCTTTATC GTCTTGCGCT CATCGGGGTG GGGCTTCTGG TGGCCTTCGG CCTGTGGCTC
CTGATCGAGC GCACCCGGAT CGGCATTCAG ATCCGTGCGG GCGAGAACGA CCGAGAGATG
ATTGCCGCCC TGGGTGTGGA CATCTCCAAG CTCTATACGC TGGTCTTTGC CCTTGGCGCC
GCGTTGGCCG GTCTTGCGGG GGCGCTGGTT GGTGCGATCC AGTCGGTGCA GGTCGGCATG
GGCGAGCCGG TGCTGATCCT TGCCTTCGTC GTGATCGTGA TCGGCGGTAT CGGATCCATC
AAAGGGGCCT TTATCGGCGC ATTGCTGGTG GGGCTCACGG ATACATTGGT CGGGATCTTC
CTGCCCGAAG TGCTCAAACT CTTTATGGAC GCGGCCCCCG CAACATCTGC CGGATCGTCG
ATCGCCTCGA TGTCGATCTA CATCCTGATG AGCCTTGTAC TGGTCTGGCG TCCCTCTGGC
CTGTTCGGAG CCCGCGCATG A
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| Protein sequence | MSTILIIEQV LNGLQSGVML FLMAAGLTLI FGVMGLINLA HGSLYMVGAF AAAAVAGVTG
SFVLALIAAL AAAALAGAVI EVAVIRRLYD SDHLDQVLAT FALILIFSEG TRWVFGSFPL
FLDIPDALSG PVTLPGGIQY PLYRLALIGV GLLVAFGLWL LIERTRIGIQ IRAGENDREM
IAALGVDISK LYTLVFALGA ALAGLAGALV GAIQSVQVGM GEPVLILAFV VIVIGGIGSI
KGAFIGALLV GLTDTLVGIF LPEVLKLFMD AAPATSAGSS IASMSIYILM SLVLVWRPSG
LFGARA
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