| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2226 |
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| Symbol | |
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| ID | 4078217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2337273 |
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| End bp | 2338112 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638007548 |
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| Product | tryptophan 2,3-dioxygenase |
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| Protein accession | YP_614220 |
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| Protein GI | 99082066 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
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| TIGRFAM ID | [TIGR03036] tryptophan 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.483292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT CCGCCTATAA TCCCGGCCAG GACGGGGCAA AGATGGGCTT TGCCGATGCC
ATGTCTTATG GCGATTACCT GCATCTGGAT GCGCTCCTGG ATCAGCAGCA CTGCAAGAGC
GATGCCCATG ACGAGATGCT GTTCATTATC CAGCATCAGA CCAGCGAGCT ATGGATGAAG
CTTGCCTTGC ACGAGCTGCA GGCGGCGCGT GAGGCCTTGC AGCAGGGGCA GACTGCCGAA
ATGTTCAAGA TGCTCGCGCG GGTGAGCCGG ATTTTTGAGC AGCTCAACAG CGCCTGGGAT
GTGCTGCGCA CCATGACGCC CGCCGATTAC ACCCGATTTC GCGAGGCTCT GGGGCCGTCC
TCGGGGTTTC AGTCCTATCA ATATCGTCTG ATCGAATATG TTCTGGGCAA TCGCAATCCC
AACATGCTGC GCCCGCATGA GCATGTGCCA GAGGTGCATG CGCTCCTCAG TGCGGAGCTG
GCGCGCCCGA GTTTTTATGA CGAGGTGAAC CGGTATCTGT TTCAGACGCT GGACGGTCAC
ACCGAAAACC TCCCCGCGCC GAGACTGGAT GCGCCGCATG CTCTGGATGA GACGATCCAA
GAGCGCTGGC TCAAGGTTTA CGGCGACATC GACACCTATT GGACCCTTTA TGAACTGGCC
GAGAAGCTGG TTGATCTTGA GGATTATTTC CGCCGTTGGC GTTTCAACCA CGTCACCACG
GTGGAGCGCG TGATTGGCTT CAAGCGCGGC ACCGGCGGCA CCTCTGGGGT GCAATATCTG
CGCCGGATGC TGAGCGTGGA GCTGTTTCCT GAACTTTGGA CCCTGAGAGG CGATCTCTGA
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| Protein sequence | MSDSAYNPGQ DGAKMGFADA MSYGDYLHLD ALLDQQHCKS DAHDEMLFII QHQTSELWMK
LALHELQAAR EALQQGQTAE MFKMLARVSR IFEQLNSAWD VLRTMTPADY TRFREALGPS
SGFQSYQYRL IEYVLGNRNP NMLRPHEHVP EVHALLSAEL ARPSFYDEVN RYLFQTLDGH
TENLPAPRLD APHALDETIQ ERWLKVYGDI DTYWTLYELA EKLVDLEDYF RRWRFNHVTT
VERVIGFKRG TGGTSGVQYL RRMLSVELFP ELWTLRGDL
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