Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2222 |
Symbol | |
ID | 4078213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2333650 |
End bp | 2334423 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638007544 |
Product | cobalt transporter subunit CbtA, putative |
Protein accession | YP_614216 |
Protein GI | 99082062 |
COG category | [S] Function unknown |
COG ID | [COG5446] Predicted integral membrane protein |
TIGRFAM ID | [TIGR02458] cobalt transporter subunit CbtA (proposed) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.338771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCAGGC CTCCACCCTG CATGATGCTG CGCATGATGT GCGCCACGCG ACCGGCTTCC CCTGCCACTA AGCAGATGTT CGCACGCATT TTGACCAGCG CGTTGTTCGC TGGTGCTGCA GCGGGGCTGA TTGCCGCCCT TCTGCAGCTT TTCTTCGTGC AGCCGGTGCT TTTGCATGCC GAACTCTATG AATCGGGCGC GCTTGTGCAT TTCGGCGGCG AGACCGTATC CGCCCATCCC GAATTGCCGG GCATCTTTGA CGAGCCGATG CGCAATTTGC TCAGCATCCT CTTCACCATG CTGATTTACA CTGGCTACGC GCTGATCCTG GTGGCCTTGA TGTCGGTTGC GGAGCGGCAA GGCCATGAAA TCCGCACCGG ACAGGGCTTG CTGTGGGGAT TGGCAGGCTT TGTGGCGCTT CACTTTGCGC CCGGTTTTTC GCTCGCACCA GAAGTGCCCG GCGTTGCCGC CGCCGATGTG GGCGCCCGTC AGATCTGGTG GGCCGCCACA GTGGCGAGCG CAGGTGTTGC CATGTGGCTG ATCGCTTTTG GCGGTAATCT GGTGGCCTAT GTGGTGGCCG CGCTCTTGTT GATGGCGCCG CATGTGATCG GCGCGCCGGA GCCCGAGACC TTTGCAGGTC CGGTGCCAAC CGAGATCGGC GCCCTTTTTG CGGCGCGCGC CTTGGGGATC GGCATGGCGG CATGGGCATT GCTCGGCGTG TTCTGTGCCT ATTTCTGGCA GACCGAAGCC GCACATGCGG ATGCCAACAC TTAG
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Protein sequence | MCRPPPCMML RMMCATRPAS PATKQMFARI LTSALFAGAA AGLIAALLQL FFVQPVLLHA ELYESGALVH FGGETVSAHP ELPGIFDEPM RNLLSILFTM LIYTGYALIL VALMSVAERQ GHEIRTGQGL LWGLAGFVAL HFAPGFSLAP EVPGVAAADV GARQIWWAAT VASAGVAMWL IAFGGNLVAY VVAALLLMAP HVIGAPEPET FAGPVPTEIG ALFAARALGI GMAAWALLGV FCAYFWQTEA AHADANT
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