Gene TM1040_2210 details

Gene Information

• Locus tag: TM1040_2210
• Symbol: cobN
• ID: 4078201
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ruegeria sp. TM1040
• Kingdom: Bacteria
• Replicon accession: NC_008044
• Strand: +
• Start bp: 2320961
• End bp: 2324206
• Gene Length: 3246 bp
• Protein Length: 1081 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 638007532
• Product: cobaltochelatase subunit CobN
• Protein accession: YP_614204
• Protein GI: 99082050
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases
• TIGRFAM ID: [TIGR02257] cobaltochelatase, CobN subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCACGTCG TCTTCCGCGA GAGCCACGGG CTCGGAGAAA CAGACACCCC CTATGACGTC 
GGGCAGACCC CCGGCGATCT GGTGGTGCTG TCGTTCTCCG ACAGCGACCT TGGCGCCTTT 
GCGGCAGGCT GGCACCGCGC GGCGGGCAAA TTGCCCTCGA CCCGGCTCGC AAATCTGGTC 
GCGCTCAAAC ATCCGCTCTC GGTGGATGTC TACGCCGAGC AAACCCTCGA AGGCGCCAAA 
GGCGTCTTGG TGCGTCTGAT TGGTGGCGAG AGCTACTGGT CCTACGGTCT GGCGACGCTT 
CAGGACCTGG CCCGGCGCAA GGGCATTGCG CTTGCCGTCC TGCCTGCCGA TGGCCAGGAA 
GATCCCCGCC TTGACGAGCT CTCGACCCTG CCGATCTCTA CCCTGCGCCG CCTTCAGGCG 
CTCTGCGATG CGGGTGGGGC CGTGGCCGCG CAGGCCGCGC TGGCGCAACT GGCACTGGCG 
TCGGGGCTAT ATGCGAGCCC CGTGATTGGT CAAAAGACGG TGCCGGATTT TGGCTATTAC 
GATCCCGACG ACGGCGCGCT CAGCGCCCTG CCCAAGACCC ATAAGCCCTT GGTGCTGGTG 
ACGTTTTATC GCTCCTATCT GACCTCCGCT GATACGGCTC CGATCGATGA AATCCTGCGG 
GGATTGCGCG CGCGTGGCTA TGCGGCTTTT GGTGCTTTCG CCCCCAGCCT CAAAGCCCCC 
GCCGCTGTCC AATGGCTACG GGCAGAGCTT TCGCAGCGCG CGCCGGTTGC GATCATCAAT 
GCCACCGCGT TTTCGGCGCA GGGGCGCGAT GGCAGCGCCT CGCCCCTGAG CCTTGTAGGA 
TGTCCCGTCT TCCAGGTCGC GCTCTCGACC GCGCGACGCA AGGACTGGGA TCTGGCGGAC 
CGGGGCCTCT CGCCTGCGGA TCTGGCCATG CATGTGGTGT TACCGGAAGT GGACGGCAGG 
CTCTTTGCCG GAGTGGTCAG CTTCAAGGCG CCGACAAAAC GCGACCCGGA TCTGCAATAC 
TCTCGCTTCA CCCATCGCGC CGATCCCGAA CGCATCTCCG CAGCACTCGA CCGGATCGAG 
GCGCATCTCA GGCTGGCACG ACAAACACGC GCCGAGACAC GCCTTGCGCT GGTGCTGTCG 
ACATATCCCG GACGCGACTA CAACCTCGCT CATGCGGTCG GGCTGGATGC GCTCGCCTCA 
ACCTCAGAGA TCCTGAGCGC CTTGGCGCGG GATGGCTATG ACGTCGCCCC TGAGGCGGAC 
CTCGGCGCGC GTCTCTCCGA CCACACGCTG ACCTGGCCCC TCTCGGATTA TATCGCGGCG 
CTCCACAAGC TGCCCGAAGC CTTGCGCGAT GACCTCAAGG CCGCATGGGG GGCGCCCGAA 
CAGGATCCAG CCGTACGCGA TCGCGTCTGC CATTTTCGCG CGCTGCGGGC CGGCAAAGCG 
CTGATCGCGC TGCAACCGGA ACGCGGCGAC GTGCAAGCCC GCGATGACGA CTATCACGAC 
CTCGAGCGCA CGCCCCGCCA TGGGTATGTT GCCTTCTACC TTTGGCTGCG TGAACAGGTG 
GATGCGCTTG TGCATGTGGG GGCACATGGC ACGCTCGAAT GGTTGCCGGG CAAGGCCGTG 
GCACTTTCTG GGGCCTGCTG GCCCGAGGTG CTCGCGGGGG ATCTGCCCGT GATCTACCCC 
TTCATCGTCA ACGACCCGGG CGAGGCCGCA CAGGCCAAGC GCCGGATCGG GGCGCTCACC 
CTCGGCCATA TGCCTCCGCC GCTGGCTGAA ACCACGCTGC CAGCCGGAAT GGGACGGCTC 
GAGAGCCTTC TGGACGAGTA TTCCACCGCC GATGGTCTTG ATCCGGCGCG CCGCGATCGG 
CTCATTGCCG ACATCCGCGC CGAAGCCCAG GGCACCGGCG TCGAAGAGGA TCTCGGCATC 
CCCACCGAGG CCTCTGCCGC AGAGGCCATC ACCCGCATTG ACCGCTTTGT CTGCGACATC 
AAGGAAAGCC AATACGGTGA GGGGTTGCAT GTCTTTGGGC GCGGTGCACA TGGCGCCGAG 
GAAATGCAGG GCCTGTTGCG CGCGCTCCGG GGAAAGCTGG TGGCACCGGG GCCGTCCGGG 
TCGCCCTACC GCGGGCGCTC GGACGTGATG CCCACCGGGC GCAACCTCTT TACCACCGAT 
CCCCGCGCGG TTCCGTCGCG GGCGGCGCAG GCGCAAGGGG TCAAACTCGC CGAAGAGCTG 
TTGCGCCGCC ATCTTCAGGA TCATGGCGAT TGGCCCTCGG GGTTGGTTGT CGATCTCTGG 
GGCTCTGCCA CCATGCGCAC CGCGGGCGAG GAATTCGCCA TGGCGCTGCA TCTTGCGGGC 
CTTGCGCCGA AGTGGGACGA AGGCTCCGAG CGCGTTTCAG GTTTTGAGAT CATTCCGCTG 
GCGCTTTTGG GGCGGCCCCG CATTGACGTG ACCCTGCGCG TCTCCGGCCT CTTTCGTGAT 
GTCTTTCCGG GTCTTGCGCA AATGTTCGAG GCCGCCGCCG CCGCCCTCGG TGCGCGCGAA 
GAAGACCCAG GCGACAACCC CTACCTTCAG ACCACGCCGC GTGTCTTTGG TCCCAAACCG 
GGTCTCTACG GGCTGGGGAT GACGCAGCAT CTGGATGACT ACTCCGACGA GGCCCGCGCG 
GCGGCTGGCG AGGCGTGGCT TGCGGCCTCT TCCCACTCGA TCGATGCCAA GGGTGAGATC 
ACCGAGGCAC GCGACGCCTT GGAAAAACGC CTGCGCAACG CGGACAGTTT CGTGCATCTC 
CAGGATCTTG CAGAAACGGA TGTGCTGGTA GCTTCTGACT ATGCCGCCCA TGAGGCGGGC 
TTTGCAGCGG CGATGAAGCG GCTTGGGGCA AAAGCGCCCT CGCTCTATCA CATGGACGCA 
ACCCGCATGG ACCGCCCGCA GGCGCGCAGC CTGCAAGAAG AAATCGCTCG CGTGACCCGC 
GCCCGGGCTG CCGATCCGCA TTGGGCCACC TCGATGATGA ACCACGGGTT TCGCGGCGCG 
GCAGAGATTG CGGCAACGCT CGATCACATG GCCGCTTTTG CGCATCTTGC GCAGGTGGTG 
CCCGCGCATC TCTTTGACCT CTATTTCGAG GCCACTCTTG GGCGTGAGGA TCTGGTGGCG 
TTTCTGGAAC GCGAGAACCC CGCCGCGCTG CAGGCGATGT GGGATCGCTT TCGCGCCCTG 
CGCGATGCCG GTCTCTGGGT GACGCGACGC AACTTCATTC TGGCCTCACT GGAGGGCGCG 
GCATGA 

 

Protein sequence

MHVVFRESHG LGETDTPYDV GQTPGDLVVL SFSDSDLGAF AAGWHRAAGK LPSTRLANLV 
ALKHPLSVDV YAEQTLEGAK GVLVRLIGGE SYWSYGLATL QDLARRKGIA LAVLPADGQE 
DPRLDELSTL PISTLRRLQA LCDAGGAVAA QAALAQLALA SGLYASPVIG QKTVPDFGYY 
DPDDGALSAL PKTHKPLVLV TFYRSYLTSA DTAPIDEILR GLRARGYAAF GAFAPSLKAP 
AAVQWLRAEL SQRAPVAIIN ATAFSAQGRD GSASPLSLVG CPVFQVALST ARRKDWDLAD 
RGLSPADLAM HVVLPEVDGR LFAGVVSFKA PTKRDPDLQY SRFTHRADPE RISAALDRIE 
AHLRLARQTR AETRLALVLS TYPGRDYNLA HAVGLDALAS TSEILSALAR DGYDVAPEAD 
LGARLSDHTL TWPLSDYIAA LHKLPEALRD DLKAAWGAPE QDPAVRDRVC HFRALRAGKA 
LIALQPERGD VQARDDDYHD LERTPRHGYV AFYLWLREQV DALVHVGAHG TLEWLPGKAV 
ALSGACWPEV LAGDLPVIYP FIVNDPGEAA QAKRRIGALT LGHMPPPLAE TTLPAGMGRL 
ESLLDEYSTA DGLDPARRDR LIADIRAEAQ GTGVEEDLGI PTEASAAEAI TRIDRFVCDI 
KESQYGEGLH VFGRGAHGAE EMQGLLRALR GKLVAPGPSG SPYRGRSDVM PTGRNLFTTD 
PRAVPSRAAQ AQGVKLAEEL LRRHLQDHGD WPSGLVVDLW GSATMRTAGE EFAMALHLAG 
LAPKWDEGSE RVSGFEIIPL ALLGRPRIDV TLRVSGLFRD VFPGLAQMFE AAAAALGARE 
EDPGDNPYLQ TTPRVFGPKP GLYGLGMTQH LDDYSDEARA AAGEAWLAAS SHSIDAKGEI 
TEARDALEKR LRNADSFVHL QDLAETDVLV ASDYAAHEAG FAAAMKRLGA KAPSLYHMDA 
TRMDRPQARS LQEEIARVTR ARAADPHWAT SMMNHGFRGA AEIAATLDHM AAFAHLAQVV 
PAHLFDLYFE ATLGREDLVA FLERENPAAL QAMWDRFRAL RDAGLWVTRR NFILASLEGA 
A