| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2205 |
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| Symbol | |
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| ID | 4078196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2315748 |
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| End bp | 2316542 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007527 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_614199 |
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| Protein GI | 99082045 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCA ACGACCGCCA AAACGAAATC CTTTCCTTGC TGACCCAGCA GGATCGCGTC
GAGGTCGAAG ACCTCGCGCA GCGCTTTGGC GTATCCTTGC AGACGGTGCG AACAGACTTG
CGTGACCTCT CTGCCCGAGG GCAGCTCAGC CGCGTGCATG GCGGCGCGAT GCGCATCAGC
TCGGCGTCAA ATCGCGGCTA TGCCGAACGG CGCAGCCTCA ACGCGACCGG CAAGCGCGCG
ATGGCAGCTC TGGCGGCTGA GGTGATCCCG GAAAACTGCT CCATCGCGCT CAATATCGGC
ACCTCCACCG AACAGGTCGC GCGTGCACTC TCTGGCCACA AGGGCCTCAC GGTGCTCTCA
AACAACATCA ACATTATCAA TATGATGATG GAAATGGAGA CGCGTGACCT GATCCTTGTT
GGCGGCTCCA TCCGGCAAAG CGACGGCGCC ATCGTCGGCG AAGAGGCCGT CGAGTTCATC
AATCGATACA AGGTCGATTA CGCCGTGATC GGCGCCTCTG CCATGGACGC CGACGGTGCC
ATCCTCGACC ACGACGCGCG CGAAGTATCC GTCGCCCGCG CGATCCTCAA AAACGCCCGC
ACGCGCATCC TGATGTGCGA CGGCAGCAAA TTCGACCGCT CTGCCCCAGT GCGCATCTGC
GCGCTGGCCG AGCTGGACCT TGTCATCACC GACCGCCCCG TTCCCGCGGA ATTTGCCGAG
GCCGCAGAGG CCGCTGGCAC ACGAATCCTC ATCGCAGACG GCGGCGCAGA AAACGAAAGC
AGCGCAAATG ACTGA
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| Protein sequence | MDANDRQNEI LSLLTQQDRV EVEDLAQRFG VSLQTVRTDL RDLSARGQLS RVHGGAMRIS
SASNRGYAER RSLNATGKRA MAALAAEVIP ENCSIALNIG TSTEQVARAL SGHKGLTVLS
NNINIINMMM EMETRDLILV GGSIRQSDGA IVGEEAVEFI NRYKVDYAVI GASAMDADGA
ILDHDAREVS VARAILKNAR TRILMCDGSK FDRSAPVRIC ALAELDLVIT DRPVPAEFAE
AAEAAGTRIL IADGGAENES SAND
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