Gene TM1040_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2202 
Symbol 
ID4078193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2311933 
End bp2313438 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content64% 
IMG OID638007524 
Producthypothetical protein 
Protein accessionYP_614196 
Protein GI99082042 
COG category[C] Energy production and conversion 
COG ID[COG3488] Predicted thiol oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.719415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGCCG CACCGCTTCA TGCGACGGAC CGCCCTGCCC CCGCGGCGCC TGGTTTGGCA 
GAGCCGCATC TGTCGATCTT GCCCCGAACC ACACATGAAA CCCGTCGGGT GGAACGCGTC
ACCGCGCCCA CTGAGGACTT TGCTGCACCC GAAGCGTTCG AGGAAAACTC TGCCGGAACT
GCGACCCTGC CGCACACAGA TGATCGCGAT GCCTTCAGCC AGCCGCCCGC AAACCTCACC
TTTGAGCAAG GGTTGGAGTT TCATCTCGGG GAAGCGCTGT TTGACAAACT ATGGGTGTTT
TCTCCGGCCT CGACGCTGGC GTCAGATGGG CTCGGCCCCG TCTACAATGC CCGCGCCTGC
CAGCGATGTC ATATCCGCGA CGGTCGTGGT CATTTGCCAG AGGGGCCGGA CTATCGCTCT
GCCTCGACGT TTTTGCGCAT ATCGATCCCG GGCCCGGTGC CACCGCACCT GCGCGCCATT
CCAGACTATA TCGGCATGGT GCCAGAGCCG ACCTATGGCT GGCAGTTGCA GGATTTTTCT
GCCCCCGGCG TAGATCCCGA ATACCGCCTG TCCGTCACCT TTACCGAGGA AGAAATTGCC
CTGAATGGCG GCGAGGTCGC GCATCTGCGC AAACCCCAAT TCGAGGCGTC TGCGCTCAAA
TACGGCCCGC TTGATTCAGA GGCTATGCTG TCACCGCGCG TCGCTCCACC GATGATCGGG
CTCGGCCTTC TGGAGGCCAT CCCGGCCGCC GACATCCTCG CGCTGGCCGA CCCGGACGAC
CTGGACGGCG ATGGCATCTC GGGGCGCGCC AACCTCGTAT GGTCGAAGGA ATTCGACCAG
GTCATGCTTG GTCGGTTTGG CCTCAAAGCC GGGACCGCCA CCATTCACGA ACAATCCGCG
GCGGCCTTCT CTGGCGATAT CGGCATCTCG ACCCCTTTGT TTCCCCAGCC CTACGGGGAC
TGCACCGCTC AGCAGGTTGA TTGCCGCGCT GCCCCTCATG GCGATGAAGA CTTGCGGGGC
ACTGAAATCG ACCAGCCCAA TATGGATCTC GTGACCTTTT ACAGCCGCAA TATCGCAGTA
CCGGCCCGCC GCAACTTGGA TGCGCCAGAG GTGTTGCGCG GTAAATCCGT ATTCTACGAG
ATCGGCTGCA CCAGCTGCCA CACCCCGAAG TTTGTCACCC ACCGCCTGAT AGACCGCCCC
GAGCAGAGCT TTCAGCTCAT CTGGCCCTAC TCTGACCTGC TGCTTCACGA TATGGGTGAG
GGGCTGGCCG ACAACCGCCC CGAAGCGCGC GCCACGGGGC GCGAGTGGCG CACCGCCCCG
CTCTGGGGGA TCGGGCTGAC GCAACAGGTC TCTGCTCGCG CCACGTTCCT GCATGATGGC
CGCGCCCGCA CCCTTCTTGA GGCGATCCTC TGGCACGGCG GCGAAGCACA AGCCGCCCGC
GACCGGGTGG TGGCCCTGCC CCCTGCCGAC CGCGCGGCGC TTATTTCATT CCTGGAGTCC
CTTTGA
 
Protein sequence
MLAAPLHATD RPAPAAPGLA EPHLSILPRT THETRRVERV TAPTEDFAAP EAFEENSAGT 
ATLPHTDDRD AFSQPPANLT FEQGLEFHLG EALFDKLWVF SPASTLASDG LGPVYNARAC
QRCHIRDGRG HLPEGPDYRS ASTFLRISIP GPVPPHLRAI PDYIGMVPEP TYGWQLQDFS
APGVDPEYRL SVTFTEEEIA LNGGEVAHLR KPQFEASALK YGPLDSEAML SPRVAPPMIG
LGLLEAIPAA DILALADPDD LDGDGISGRA NLVWSKEFDQ VMLGRFGLKA GTATIHEQSA
AAFSGDIGIS TPLFPQPYGD CTAQQVDCRA APHGDEDLRG TEIDQPNMDL VTFYSRNIAV
PARRNLDAPE VLRGKSVFYE IGCTSCHTPK FVTHRLIDRP EQSFQLIWPY SDLLLHDMGE
GLADNRPEAR ATGREWRTAP LWGIGLTQQV SARATFLHDG RARTLLEAIL WHGGEAQAAR
DRVVALPPAD RAALISFLES L