| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2197 |
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| Symbol | |
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| ID | 4078188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2307335 |
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| End bp | 2309056 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007519 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_614191 |
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| Protein GI | 161899027 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAA TTCTCATCAC CTCGGCACTG CCCTATATCA ATGGGATCAA GCACCTCGGC
AACCTCGTGG GGAGCCAACT TCCTGCCGAT CTCTATGCCC GCTACAACCG GGGACGCGGC
CATGAGGTCA TGTTCCTCTG CGCGACCGAC GAACACGGCA CCCCCGCAGA ACTGGCCGCA
GCCAAAGCCG GCAAGCCCGT GGCCGATTAT TGCGCCGAAA TGCACGCCGT GCAGGCCGAC
ATCGCCAAGC GGTTTGGCCT GTCGTTTGAC CATTATGGCC GCTCCTCGAG CCCGCAGAAC
CACGCGCTGA CTCAGCATTT TGCGGGCAAG CTCGAAGAGG CTGGCCTGAT TACCGAAGTG
TCGGAAAAAC AGGTCTATTC CAACGCCGAT GGCCGCTTTC TGCCTGATCG CTATATCGAG
GGCACCTGCC CCAACTGCGG CTTTGAGAAG GCGCGCGGCG ATCAATGCGA GGAATGCACC
AAACAGCTCG ATCCGACCGA CCTCATCAAC CCGCGCTCTG CGATCTCGGG GTCGACCGAC
CTTGAGGTGC GCGAGACCAA GCACCTGTTC CTGCGCCAGT CCGCAATGCG CGACCAACTG
GACCAGTGGA TAGACTCTAA GACCGACTGG CCGGTGCTCA CCACCTCGAT TGCCAAGAAA
TGGCTGCATG ATGGCGACGG TTTGCAGGAC CGGGGCATCA CCCGTGACCT CGACTGGGGG
ATTGCGGTCA AAAAAGGCGA CGCGGACTGG CCTGGCATGG AAGGCAAGGT CTTCTACGTC
TGGTTCGACG CACCGATTGA ATATATCGCA GCCGCTGGCG AATGGGCCGA GGCCCATGGC
AAAACCGATG CCGATTGGGA GCGCTGGTGG CGCACCGACA AGGGCGCGGA TGACGTCAAA
TATGTGCAGT TCATGGGCAA GGACAACGTT CCCTTCCACA CCCTGTCCTT CCCCGCGACC
CTGCTGGGGT CGGGCGAGCC GTGGAAGATG GTCGATCATC TGAAATCCTT CAACTACCTC
AACTATGATG GCGGTCAGTT CTCCACCTCG CAGGGGCGCG GCGTGTTCAT GGATCAGGCG
CTCGAGATCC TGCCTGCCGA TTACTGGCGC TGGTGGCTGC TGTCCCATGC CCCCGAAAGC
TCCGATTCCG AATTCACCTG GGAGAACTTC CAGCAATCGG TGAACAAGGA TCTGGCGGAT
GTGCTTGGGA ACTTTGTCTC GCGCATCACC AAATTCTGCC GCTCGAAATT TGGCGAAGAG
GTGCCCGATG GCGGCACCTG GGGCGAACAG GAACAGACCC TCATTGAAGA GCTCTCCACC
CGCATCGGCG CCTTTGAACG CCATATGGAG GCGATGGAGG TGCGCAAATC GGCGCAGGAA
CTCCGCGCGA TCTGGGTTGC GGGCAATGAA TACCTGCAAT CTGCCGCGCC TTGGTCGGTG
TTCAAGGAAG ACCCCGAGCG CGCGGCAGGT CAGGTCCGCC TCGGCCTCAA TCTGATCCGT
CTCTATGCGG TTCTGTCGGC GCCCTTCATT CCAGATGCCT CCGATCGCCT GTTTGCCGCT
CTCGGCACCG AGGATCGCAG CTGGCCCGAA GACGTTGCCG CCGCACTCGC CGCCTTGCCC
GCAGGCCATG CCTTCACGGT GCCGGAGGTG CTCTTTGCCA AGATTACCGA TGAGCAGCGC
GAAGAGTGGC AAGAGCGCTT TGCCGGAGGT CGCAGCGCCT AA
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| Protein sequence | MARILITSAL PYINGIKHLG NLVGSQLPAD LYARYNRGRG HEVMFLCATD EHGTPAELAA
AKAGKPVADY CAEMHAVQAD IAKRFGLSFD HYGRSSSPQN HALTQHFAGK LEEAGLITEV
SEKQVYSNAD GRFLPDRYIE GTCPNCGFEK ARGDQCEECT KQLDPTDLIN PRSAISGSTD
LEVRETKHLF LRQSAMRDQL DQWIDSKTDW PVLTTSIAKK WLHDGDGLQD RGITRDLDWG
IAVKKGDADW PGMEGKVFYV WFDAPIEYIA AAGEWAEAHG KTDADWERWW RTDKGADDVK
YVQFMGKDNV PFHTLSFPAT LLGSGEPWKM VDHLKSFNYL NYDGGQFSTS QGRGVFMDQA
LEILPADYWR WWLLSHAPES SDSEFTWENF QQSVNKDLAD VLGNFVSRIT KFCRSKFGEE
VPDGGTWGEQ EQTLIEELST RIGAFERHME AMEVRKSAQE LRAIWVAGNE YLQSAAPWSV
FKEDPERAAG QVRLGLNLIR LYAVLSAPFI PDASDRLFAA LGTEDRSWPE DVAAALAALP
AGHAFTVPEV LFAKITDEQR EEWQERFAGG RSA
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