| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2186 |
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| Symbol | |
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| ID | 4076785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2295598 |
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| End bp | 2297073 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007508 |
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| Product | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase |
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| Protein accession | YP_614180 |
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| Protein GI | 99082026 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.628959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAA CAGCAGCAAT CATTGGCGGT GGCGTTATCG GCGGCGGTTG GGCCGCGCGG
TTCTTGCTCA ATGGCTGGGA TGTGCGGGTC TTTGACCCGG ATCCCGAAGC CGAGCGCAAG
ATTGGCGATG TTCTTGCCAA TGCCCGCCGC AGCCTGCCCG GGCTTGGCAA TGTGGCGCTG
CCACCCGAAG GAAGTCTGAG CTATCATGAG ACCCTCGCGG AAACCGTGCA GGGCGTCGAC
TGGGTACAGG AGAGCGTGCC CGAGCGGCTC GATCTGAAAC AGAAAGTATA CGCAGAGCTC
GAGGCGCATG CGCCCGGGGG CGCGGTGATT GGTTCGTCGA CCTCGGGCTA CAAGCCCTCG
CAATTGCAGG ACGGGTTCAC CAACGCCGCA CAGATCGTTG TGGCGCATCC TTTCAATCCG
GTCTACCTCA TGCCGCTGGT GGAGGTGGTC ACAACTGATG TGAACACGCC CGAGATGATT
GCCAAGGCCA AGGCGATCAT CACCGAAATC GGCATGTATC CCTTGCACTT GAAAAAGGAA
ATCGACGCTC ATGTGGCGGA CCGGTTCCTT GAGGCGGTCT GGCGCGAGGC GCTGTGGCTG
GTAAAAGATG GCATCGCCAC CACCGAAGAG ATCGACAACG CGATCCGCTA TGGCTTTGGC
ATCCGCTGGG CGCAGATGGG GCTGTTTGAA ACCTACCGCG TTGCGGGCGG CGAGGCGGGC
ATGAAGCATT TCATGGCGCA GTTCGGCCCG GCTCTCAGCT GGCCCTGGAC CAAACTGATG
GATGTACCCG AGTATAATGA TGCGTTGGTC GACCTGATCG CAGGCCAGTC GGACGCACAG
TCAGGGCAGT ATTCCATCCG CGAGCTCGAG CGTATCCGCG ATGACAACCT CGTGGGGATG
ATGCGGGCGC TGGGCGCAAA CAACTGGGGT GCCGGGGCGC TTCAGAATGC TCATGACGCC
GCGCGCCTGT CAGAGGCGGG GCTTGCGCGC AGCATGGAGG ACGTTGCCGA TCTGTCGCAG
CCCATCCTCA CCCAGAGCCG CGTCGTGCCG CTCGATTGGA CCGACTACAA CGGCCACATG
ACCGAGAGCC GCTATCTGGA TGCCTTTGCC CAATCCACTG ACCGGCTGAT GGAGATCATC
GGCTGTGACG CCGACTATAT CGCCTCAGGC GGCAGCTACT TCACCGCCGA GACCCATATC
CGCCATATCG ACGAGGTCCA CGCGGGCCAC CCGGTCCAAG TCCGAACGCG GGTCATAATG
GGCGCGGGTA AGAAGATGCA CCTCTGGCAC GAGATGTATG AAGGCGACCG CCTCCTGGCG
ACCGGCGAGC ATATGCTCTT GCATGTGGAT CTGAAAACCC GCCGCTCGGC ACCGCCGGCC
GCGCATATCG AGGCCAATCT TGTGAAGCTC GCCGAGGCAC ATGCGGCGTT GCCCGCACCC
GAAGGGCTGG GTCGCGCCAT CGGTGCGCCT CGCTAA
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| Protein sequence | MTKTAAIIGG GVIGGGWAAR FLLNGWDVRV FDPDPEAERK IGDVLANARR SLPGLGNVAL
PPEGSLSYHE TLAETVQGVD WVQESVPERL DLKQKVYAEL EAHAPGGAVI GSSTSGYKPS
QLQDGFTNAA QIVVAHPFNP VYLMPLVEVV TTDVNTPEMI AKAKAIITEI GMYPLHLKKE
IDAHVADRFL EAVWREALWL VKDGIATTEE IDNAIRYGFG IRWAQMGLFE TYRVAGGEAG
MKHFMAQFGP ALSWPWTKLM DVPEYNDALV DLIAGQSDAQ SGQYSIRELE RIRDDNLVGM
MRALGANNWG AGALQNAHDA ARLSEAGLAR SMEDVADLSQ PILTQSRVVP LDWTDYNGHM
TESRYLDAFA QSTDRLMEII GCDADYIASG GSYFTAETHI RHIDEVHAGH PVQVRTRVIM
GAGKKMHLWH EMYEGDRLLA TGEHMLLHVD LKTRRSAPPA AHIEANLVKL AEAHAALPAP
EGLGRAIGAP R
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