| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2184 |
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| Symbol | |
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| ID | 4076783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2293906 |
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| End bp | 2294775 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007506 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_614178 |
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| Protein GI | 99082024 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.233914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATA AAATCGACAA ACGCCTCCGG GCGGTACAGT TTCGGGACCG CCTTGAGCGC
GCGCTGCGCG ACAGCGGCCT CAGTCAGAGC GCTTTGGCGC GCGCCACCGG TGTGGATCGC
TCGACAATTT CGCAGCTCTT GACGGACGAT GGCGCGCGCT TGCCCAATGC GCATGTGATC
GGCGCCTGCG CAGAGGCATT GGGTGTGTCG GCCGATTGGT TGCTGAGCCT CTCGGAGCGC
CCAGAAAGCG CCGCGGAACT GCTGGCCTCC TCTATTGCGA TGACTGAAGC GCCACGCGCG
CTGGTGGATG AACGGATTTA CGAGTGGCAT CGCGAGGCCG CCGGCTACAA GATCCGCCAT
GTGCCCGCGA CGCTGCCCGA TATGCTCAAG ACGCGCGCGG TGCTCGAATG GGAATATGCG
CCACACCTGG GGCGCACCGC CGATCAGGCC ATCGGCGCTT CCGAGGACCG GCTCACTTGG
ATGCGGCAGG CCGGGTCAGA TTACGAGATC GCGCTGCCCA TCTATGAGGT CGACAGCTTT
GCCAAAGGGG TAGGCTATTA CGAGGGACTA TCGGCTGAAA TCCGCATCGA GCAGCTTGAG
CATCTGGAGC GGCTGACCAC GCAGCTATAC CCGCGCCTGC GGGTCTATCT CTACGATGCA
AAGCGATTAT ATTCGTCGCC GTTGACGGTG TTTGGGCCGC TCTTATGCGT GTTCTATGCC
GGCAGTCACT ACATGGCCTT TCGAGATCGC GCGCGGGTAG AAACCTACAC CGGTCATTTT
GATCGCCTGG TGCGCGAGGC AGACATCACC GCCCGGCAGG TTCCCGGGCG CCTGCGCGCA
CTGCGCGCAC AGATCGGGGT GGCGACGTAG
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| Protein sequence | MTDKIDKRLR AVQFRDRLER ALRDSGLSQS ALARATGVDR STISQLLTDD GARLPNAHVI
GACAEALGVS ADWLLSLSER PESAAELLAS SIAMTEAPRA LVDERIYEWH REAAGYKIRH
VPATLPDMLK TRAVLEWEYA PHLGRTADQA IGASEDRLTW MRQAGSDYEI ALPIYEVDSF
AKGVGYYEGL SAEIRIEQLE HLERLTTQLY PRLRVYLYDA KRLYSSPLTV FGPLLCVFYA
GSHYMAFRDR ARVETYTGHF DRLVREADIT ARQVPGRLRA LRAQIGVAT
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