| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2177 |
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| Symbol | |
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| ID | 4076776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2288888 |
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| End bp | 2289514 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638007499 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_614171 |
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| Protein GI | 99082017 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0116551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG AGACGGGCGT TGATCGTGCG CATGGCGCGA CGCGGGCCAC CTTTGTGGAG
CCCGCGCTCA GCGACGAAGC CTTGCTGATC CGCTTCGGCA ATGGCGATCC TTCGGCGGCG
ACAGAGCTGA CCCGGAGGCT TGCGCCGCGG GTGCTGTCAC TGGCGACACG GGTATTGGGC
AATCGCGCAG AGGCCGAAGA CGTGACCCAG GAAGCGATGC TCAGGCTGTG GAAAATCGCG
CCCGACTGGC GAAATGGCGA GGCCCGCGTC TCTACTTGGC TCTATCGTGT GGGGATGAAT
CTTTGCATCG ACCACAAACG CCGGGTTCGT GGCGGGCATG TGGATCTGGA CGCGATCCCG
GAACCTCCTG ACCCTGCGGC CGGGGCGGCG GAGGCTCTTC AGGAGGGGGC GCGCCGGGAC
GCGCTGCAAG ATGCGCTGAT GACCTTGCCC GAGCGGCAAC GTCAGGCCGT GGTGCTGCGC
CACATAGAGG AACTGACGAA CCCGGAAATC GCCGGGGTCA TGGAGATCAG CGTGGAGGCC
GTGGAAAGCC TGACCGCACG GGGCAAACGC GCTTTGGCCG CAGCATTGGC GGGTCGGCGC
GAGGAATTGG GGTATCAAGA TGGGTAA
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| Protein sequence | MTAETGVDRA HGATRATFVE PALSDEALLI RFGNGDPSAA TELTRRLAPR VLSLATRVLG
NRAEAEDVTQ EAMLRLWKIA PDWRNGEARV STWLYRVGMN LCIDHKRRVR GGHVDLDAIP
EPPDPAAGAA EALQEGARRD ALQDALMTLP ERQRQAVVLR HIEELTNPEI AGVMEISVEA
VESLTARGKR ALAAALAGRR EELGYQDG
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