| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2171 |
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| Symbol | |
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| ID | 4076770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2283726 |
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| End bp | 2285285 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007493 |
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| Product | trimethylamine methyltransferase |
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| Protein accession | YP_614165 |
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| Protein GI | 99082011 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG5598] Trimethylamine:corrinoid methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGA CACAAGCGCG CCGACGCCGG GGAGGAGGCC GGGCCGGTGC AGCCGCCCGT
CGGGGAGCCG CCACTTTGGA GCAGATGCCA TGGAAGCCTC CGGTCAATAT TGACCGCCCG
GTCGAGCCGC TCACCGCAGA GGGTATTGCC GCAATCCATG ATGGCGCGAT GCGCATTCTC
GAGGAGATCG GCGTCGAGTT CCTGAACGAC GAAGCGCTTG AGATCTTCAA GGAGGCGGGG
CTCAAGGTGG ATGGCGCTTT GGTGCGCATG GACCGCGAGT TTGTGATGGA GATGGTGGGC
AAGGTCCCCT CGGAGTTCAC CCTTACGCCG CGCAACCCAG AGCGCGCCAT TCGCATCGGC
GGCAATTCGA TCGTCTTTGG CAATGTGTCC TCGCCGCCGA ACTATTGGGA TATGGACCTG
AACAAGAAGG TCCCCGGCAC CCGTGAACAC TGCCAGAACC TGCTGAAATT GACGCAGTAT
TTCAACTGCA TCCATTTTGC GGGGGGCTAT CCGGTGGAGC CTGTCGATCT CCATGCCTCG
ATCCGTCACC TCGATGTGCT TTATGACAAG CTCACGCTCA CCGACAAGGT GATGCATGCC
TATTCGCTCG GCAAAGAGCG GGTCGAGGAC GTGATGGAGA TGGTGCGCAT CGCGGGTGGT
CTGAGCCATG AGGAATTCGA CTCCCAACCG CACATGTACA CCAACATCAA CTCCACCTCG
CCCTTGAAGC ATGACGAGCC GATGATTGAT GGTGCGCTGA GGCTGGTGCG GCGGGGCCAA
CCCGTGATCG TGTCACCGTT CACGCTGGCA GGCGCGATGG CTCCGGTCAC CATGGCGGGG
GCCGTGGCGC AGTCGCTGGC AGAGGCGCTC TGCGCCATTG CCCTGTTCCA ATATGTCCGC
CCCGGCACGC CCTGCGCGAT CGGAACGTTT ACCTCCAATG TCGACATGAA GTCCGGAGCA
CCTGCATTTG GAACTCCTGA ATATATGCGC GCGACTCAAA TGACCGGGCA GATGGCACGA
TTTTACGGAT TGCCGATGCG GTCCTCCGGC GTTTGCGCGG CCAATGTGCC GGATGGGCAA
GCCATGTGGG AGACGTCGAA CTCGCTCTGG GCAGCGGTGC AGTCGGGCAC GAATATGGTC
TACCACGCTG CGGGCTGGCT CGAAGGCGGG CTGATCGCCT CTCCAGAGAA ATTCATCATG
GATTGCGAGG TCTTGCAGAT GATCCAGCGC TACATGGACC CGGTCATCAA TGCCACCGGC
CCCGAGGAAA TCGCGCTCGA TGCGATCCGG GAGGTCGGAA ATGATGGACA TTTCTTCGGC
ATCCAGCACA CGCAGGATCG TTATGCGACA GCCTTTTATC AGCCGTTCCT GAGCGACTGG
CACAATTATG AGGCTTGGGA GGCCGCGGGC GGAACCTGGA CCGCGCAGCG AGCAAACGGT
CTCTTCAAGC AGATCATCAA CGAATTCGAG GCTCCGACGC TTGATGAGGG CATTCGCGAA
GAGCTGCAGG CCTTCGTCGC CCGCCGGAAG GAAGAAGGCG GAGCCCCCAC AGATTTTTAA
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| Protein sequence | MSQTQARRRR GGGRAGAAAR RGAATLEQMP WKPPVNIDRP VEPLTAEGIA AIHDGAMRIL
EEIGVEFLND EALEIFKEAG LKVDGALVRM DREFVMEMVG KVPSEFTLTP RNPERAIRIG
GNSIVFGNVS SPPNYWDMDL NKKVPGTREH CQNLLKLTQY FNCIHFAGGY PVEPVDLHAS
IRHLDVLYDK LTLTDKVMHA YSLGKERVED VMEMVRIAGG LSHEEFDSQP HMYTNINSTS
PLKHDEPMID GALRLVRRGQ PVIVSPFTLA GAMAPVTMAG AVAQSLAEAL CAIALFQYVR
PGTPCAIGTF TSNVDMKSGA PAFGTPEYMR ATQMTGQMAR FYGLPMRSSG VCAANVPDGQ
AMWETSNSLW AAVQSGTNMV YHAAGWLEGG LIASPEKFIM DCEVLQMIQR YMDPVINATG
PEEIALDAIR EVGNDGHFFG IQHTQDRYAT AFYQPFLSDW HNYEAWEAAG GTWTAQRANG
LFKQIINEFE APTLDEGIRE ELQAFVARRK EEGGAPTDF
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