| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2160 |
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| Symbol | |
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| ID | 4076759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2270248 |
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| End bp | 2271159 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007480 |
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| Product | Pirin-like |
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| Protein accession | YP_614154 |
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| Protein GI | 99082000 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.194706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGC GCCCGATTTT GGAAAAACGT TCAGCCCAGC CAACCATGGA AGGCGCTGGC
GTACATCTGC ACCGCGCTTT TGGGTTTCAG GATCCAAGCG AGCTGGACCC TTTCCTGCTG
TTTGATGATT TCCGCAACGA CCATCCGGAG CTGTATCAGC AGGGATTTCC CTGGCACCCA
CACCGCGGCA TCGAGACGAT CACCTATGTG CTGGCGGGCT CTGTTGACCA CGGTGACAGC
CTCGGCAACA CTGGCACGCT GGGCGCAGGG GATGTGCAGT GGATGACCGC CGGTTCGGGT
ATCCTGCATC AGGAAATGCC GAGCGGAAAC CAGAAGGGGC AGATGCACGG TTTCCAGCTT
TGGGGCAATC TTCCGTCCGC CCAAAAGATG ACGGCCCCAC GGTATCAGGA TGTCCAGGGC
AAGGATATTC CCGAGGTGAT CGACGATGAC GGCACCCGCG TCAAAGTGAT CGTGGGCGAA
TTCTGGGGCA AGCGCGGCCC CGTTGATGGC ATCGCCGCCG ACCCGCAATA TCTCGACGTC
TATGTCCCCG CCGGTGTCAA AAAGACGTTC AAGATCGACA CATACCGACG CGCTTTTGCC
TATATTTTTG AAGGCCAAGC CGCCTTTGCG GATGCCTCCC AGCCGCAGGG TGTCCTGTTG
GAAAAAGAGG TTGCCGGCCA GGAGGTCAAC ATCCGCGATC TCTCGGGAGA TCGCACATTG
GTGCGTTTTG GCACTGGCGA AGAGATCACC GTGCAGGCCG GCCCCGAGGG CGTGCGTTTC
CTGCTCATTT CTGGCGCACC GATCGAGGAG CCAGTGGCAT GGCATGGTCC GATCGTGATG
AACACACAGG CCGAGCTGCA AAAAGCCTTC TCCGAGTTGC GCAACGGAAC CTTCATCAAA
CCCGCTCACT GA
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| Protein sequence | MSLRPILEKR SAQPTMEGAG VHLHRAFGFQ DPSELDPFLL FDDFRNDHPE LYQQGFPWHP
HRGIETITYV LAGSVDHGDS LGNTGTLGAG DVQWMTAGSG ILHQEMPSGN QKGQMHGFQL
WGNLPSAQKM TAPRYQDVQG KDIPEVIDDD GTRVKVIVGE FWGKRGPVDG IAADPQYLDV
YVPAGVKKTF KIDTYRRAFA YIFEGQAAFA DASQPQGVLL EKEVAGQEVN IRDLSGDRTL
VRFGTGEEIT VQAGPEGVRF LLISGAPIEE PVAWHGPIVM NTQAELQKAF SELRNGTFIK
PAH
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