| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2159 |
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| Symbol | |
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| ID | 4076758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2268651 |
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| End bp | 2270105 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007479 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_614153 |
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| Protein GI | 99081999 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.318681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.208932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTGC AGAAAACGGA CATCCGTCCC TCCATCGGCC TAGCGCTGCT GCCGATCGTG
CTGACGCTCG CCATTCTTGG GGTGCAGATC TTTTACTTTG GGGATTTCAC CCCCCATATC
CCACTTGCAA TCGGGATCGC CCTCACCGCG GTGGTGGGCC TGATCGAAGG GCTGAGCTGG
GATGAGATCG AAAAAGGCGC CTTTCATGTG ATCGCAGTGT CTTTCCCGGC GGTGTCGGTG
CTGATCCTTG TCGGCATGAT CGTTGGCACA TGGATCGCCT CCGGCACCGT TCCCACGCTG
ATCTATTACG GGCTGTCGCT GCTTTCGCCA GAGCTGTTTC TCGCGGCGGG GATGATCCTC
TGCTCCATCG TCTCGCTTGC CCTCGGGACA TCCTGGGGCA CGGTCGGCAC AGTGGGTCTC
GCGCTGATGG GCATCGGCGA AGGCTTTGGC ATCCCGGCCT ACTGGACTGC AGGCGCGGTG
GTTTCAGGCG CCTTCTTTGG CGACAAGATC TCGCCCCTTT CGGATACCAC CAACCTGGCC
CCGGCCGTGA CTGATACGCA GCTATTTGAC CACATCCGCA ACATGTTGCC GACCACTGTT
CCCGCGATGC TGATCGCGCT GGCGATCTAC ACTGTGATGG GGTTCAACCT TGGTGACGGC
GCGCCCTCCT TTGAACGCAT CGAGAGCTTC AAGGGCGCGC TGGAGGGGTC GTTTGACATC
ACGCCCTGGC TGCTATTGCC CGCGCTTTTG GTGGTCGGGC TTGCAATGAT GCGCATGCCG
GCGATCCCGA CTCTGTTCAT CGGTGTCGTG GTAGCGTCTC TGATTGCGAT CTTTGTGCAG
GGCGCATCGC TGCATGACGT TTTCACCTAT GCCAACTACG GCTATTCGGT CGAAACCGGC
GTCGCCGCAA TGGACTCGCT GATGAACCGG GGCGGGATCC AGTCGATGAT GTGGACCATC
TCTCTGATCC TGATCGCGCT TGGCTTTGGC GGCGCGTTGG AGCGCACGGG CTGCCTTGCG
GCCATCATCG AGCTTTTGAC CAAGCGGGTG AAAACCATCG CGGGTGTGCA GACCTCGGCG
ATCCTGTCCT CCATGGCGAC CAACACCGTG GCGGGCGATC CCTATCTCTC GATCGCGCTG
CCTGGGCGGA TGTTCAAGCC GGTCTACGAC CGTATCGGCT ATTCGCGCCT GAACCTGGCA
CGCGCCACCG AGGAAGGCGG CACCATCATC TCGCCGCTGA TCCCGTGGAA CGCCGGTGGC
GCCTTTGTGA TCTCGGCCCT CGCGCTGGGT GTCTCGGACG GCAAGATCGA AAACCTGCTC
TACATCCCGC TGTCCTTTGC CTGCTGGCTG GCCCCGGTCT TTGGGATCTT CTACGCATGG
ACCGGCCTTT TTACACCCAA GGCCGAAGCG GCTGACACCG TGCGCGCAGA AGCCGCGCAG
CACCCCGCAG AGTAA
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| Protein sequence | MPLQKTDIRP SIGLALLPIV LTLAILGVQI FYFGDFTPHI PLAIGIALTA VVGLIEGLSW
DEIEKGAFHV IAVSFPAVSV LILVGMIVGT WIASGTVPTL IYYGLSLLSP ELFLAAGMIL
CSIVSLALGT SWGTVGTVGL ALMGIGEGFG IPAYWTAGAV VSGAFFGDKI SPLSDTTNLA
PAVTDTQLFD HIRNMLPTTV PAMLIALAIY TVMGFNLGDG APSFERIESF KGALEGSFDI
TPWLLLPALL VVGLAMMRMP AIPTLFIGVV VASLIAIFVQ GASLHDVFTY ANYGYSVETG
VAAMDSLMNR GGIQSMMWTI SLILIALGFG GALERTGCLA AIIELLTKRV KTIAGVQTSA
ILSSMATNTV AGDPYLSIAL PGRMFKPVYD RIGYSRLNLA RATEEGGTII SPLIPWNAGG
AFVISALALG VSDGKIENLL YIPLSFACWL APVFGIFYAW TGLFTPKAEA ADTVRAEAAQ
HPAE
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