Gene TM1040_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2153 
Symbol 
ID4076752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2261229 
End bp2261834 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content56% 
IMG OID638007473 
Producthypothetical protein 
Protein accessionYP_614147 
Protein GI99081993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.740533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0419254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGAA AAATCGCACA TAAGTTTCGG GCGTTTCGCC GCGATGAAGA GGGCAACATT 
GCCGTCGAGG CCGCGCTCTA CCTGCCACTC TTGCTGTTTG TCTTTGCGGC GACCTACACG
CTGTTTGACC TGTTCCGTCA GGAAACCGTC AACACCAAGG CCGCTTATAC CGTCTCAGAC
CTGATTTCGC GGGAAACCAC GGCGCTAAAC GACGAATACA TCAACAGTAT CTATACCCTC
GGCAAGCTGA TGGCGCGCGC GGGCTCTGAT ATGTCGATGC GCATTTCGGT GATCCGCTGG
GACGCTGCGG ATGATCGCTA TTATGTCGAT TGGTCCGTCG AACGTGGCAA CCAGCTCGAC
ATCTGGACGG ATGCCACCGT CACCGCGATC AACGACAAGC TCCCCACCAT GCCCGATCAG
GAACGTGTCA TCGTGGTCGA GACATGGAAC AACGTCGACC CGGCGTTCAA AATCGGGATC
GGGCAGCGTG AAATCTACAA TCTGATCTTC ACCCGTCCCC GTTTCGCCTC CTTGGTGGCC
TTTGAAGGCA CCGTCGTAAG CGATGGCACG GTGCATGACG ATGACGTGAC GGACACGGGT
TCCTGA
 
Protein sequence
MFRKIAHKFR AFRRDEEGNI AVEAALYLPL LLFVFAATYT LFDLFRQETV NTKAAYTVSD 
LISRETTALN DEYINSIYTL GKLMARAGSD MSMRISVIRW DAADDRYYVD WSVERGNQLD
IWTDATVTAI NDKLPTMPDQ ERVIVVETWN NVDPAFKIGI GQREIYNLIF TRPRFASLVA
FEGTVVSDGT VHDDDVTDTG S