Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2153 |
Symbol | |
ID | 4076752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2261229 |
End bp | 2261834 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638007473 |
Product | hypothetical protein |
Protein accession | YP_614147 |
Protein GI | 99081993 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.740533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0419254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGAA AAATCGCACA TAAGTTTCGG GCGTTTCGCC GCGATGAAGA GGGCAACATT GCCGTCGAGG CCGCGCTCTA CCTGCCACTC TTGCTGTTTG TCTTTGCGGC GACCTACACG CTGTTTGACC TGTTCCGTCA GGAAACCGTC AACACCAAGG CCGCTTATAC CGTCTCAGAC CTGATTTCGC GGGAAACCAC GGCGCTAAAC GACGAATACA TCAACAGTAT CTATACCCTC GGCAAGCTGA TGGCGCGCGC GGGCTCTGAT ATGTCGATGC GCATTTCGGT GATCCGCTGG GACGCTGCGG ATGATCGCTA TTATGTCGAT TGGTCCGTCG AACGTGGCAA CCAGCTCGAC ATCTGGACGG ATGCCACCGT CACCGCGATC AACGACAAGC TCCCCACCAT GCCCGATCAG GAACGTGTCA TCGTGGTCGA GACATGGAAC AACGTCGACC CGGCGTTCAA AATCGGGATC GGGCAGCGTG AAATCTACAA TCTGATCTTC ACCCGTCCCC GTTTCGCCTC CTTGGTGGCC TTTGAAGGCA CCGTCGTAAG CGATGGCACG GTGCATGACG ATGACGTGAC GGACACGGGT TCCTGA
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Protein sequence | MFRKIAHKFR AFRRDEEGNI AVEAALYLPL LLFVFAATYT LFDLFRQETV NTKAAYTVSD LISRETTALN DEYINSIYTL GKLMARAGSD MSMRISVIRW DAADDRYYVD WSVERGNQLD IWTDATVTAI NDKLPTMPDQ ERVIVVETWN NVDPAFKIGI GQREIYNLIF TRPRFASLVA FEGTVVSDGT VHDDDVTDTG S
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