| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2142 |
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| Symbol | dnaG |
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| ID | 4076456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2247809 |
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| End bp | 2249818 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007462 |
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| Product | DNA primase |
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| Protein accession | YP_614136 |
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| Protein GI | 99081982 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.512504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGC CCCCCGGTTT CCTTGATGAA TTGCGCACCC GCATCAGCCT GTCTGACGTT
GTCGGGCGCA AGGTCATGTG GGATCAGCGC AAAAGCCAGC CGGGCAAGGG CGACATGTGG
TCTCCGTGCC CCTTTCATCA TGAAAAAACC GCTTCTTTTC ATGTGGATGA TCGCAAAGGA
TTTTACTACT GCTTTGGCTG TCACGCCAAA GGGGATGCGC TGAAATTCGT GCAGGAGACA
GAGAATGTCT CCTTTATGGA GGCGGTAGAG ATCCTTGCGG GCGAGGCCGG GCTGGAGATG
CCCAAGCGCG ACCCCAAAGC GGCTGAGAAA CAGGACCGTC GCACGCAGCT TGCTGAGGTG
ATGGAACAGG CGGTGAAATA CTTCCGCCTG CAACTCAAGA CTCAAGCCGC GAGTGAGGCG
CGCGCCTACC TCGCGCGTCG GGGGCTTGAT GCGGCAGCGC TGGACCGCTG GGAGATCGGC
TTTGCCCCCG ATGGCTGGCA GAACCTTTGG GATGCGCTCA AAGGCAAGGA CATCGCGGAT
GATCTGATCC TCGGTGCCGG GCTGGCCAAA CCCTCGAACA AGGGCAAGAA GCCCTATGAT
GTGTTTCGCA ACCGGATCAT GTTCCCGATC CGGAATGCGC GGGGCCGGGC GATCGCCTTT
GGCGGCCGGG CGATGGATCC CAATGACAAC GCCAAATACC TGAACTCGCC GGAAACCGAG
CTGTTTGATA AGGGGCGCAA TCTCTATAAC CACGGGCCCG CGCGCGCGGC CTCGGGACGG
GGCAGCACCT TGATCGTGGC CGAAGGCTAC ATGGATGTGA TCGCGCTGTC CGAGGCGGGG
TTCCAGTCGG CGGTGGCGCC CTTGGGTACA GCCGTCACCG ACAACCAGCT GCATCTTTTA
TGGCGCATGT CGGACGAGCC GGTGATTGCG CTGGATGGGG ATACGGCTGG TCTGCGCGCG
GCGATGCGGC TGATCGATAT GGCGCTGCCT CTGCTCGAGG CCGGGAAGTC CTTGCGCTTT
GCCATCATGC CCGAGGGCAA GGACCCAGAT GATCTTATTC GCGCCGAGGG ACCAGAGGCG
GTGCAGGCGG TGCTGGATCA GGCGATTCCG ATGGTACAGC TGCTCTGGCG CCGCGAGACC
GAAGGGCGGG TGTTTGACAG CCCCGAGCGC AAAGCGGCCC TGGACAAGTC CCTGCGTGAA
AAGATCAAAT TGATCCGTGA CCCTTCTATT CGCCTGCATT ACGCCAATGA TATCAAGGAG
CTTCGCTTTC AGCTCTTTCG CGGTCAGCGT GGCGGTGGCG GGCAGGGGGG CACCGGCTAT
GGCCAGCGGT ACGGCGGTTT CAAACCGGGC TCCCGCATGC AGGGTGGATT TCGCGACGGC
GCCCGCATGC CTTGGGGTGC GCCGCCCCCG CCCCGCAGCA CCACACGGGC CTCGATGGTG
GCCTCCTCCG AGGAACAGGA CTTTGCCCGC GTGCGCGAGG CGGTGATCCT CGCCACAGCA
ATCACCACGC CCACGGTGAT CCCGGAATTC GAAATCAATC TTGAGCGCAT GCAGTGTCAG
GACATGGAAC ATGCCCACCT GCGCGATCTG GTTCTGCGCT ATGGGATCGA GGCCCCGGAG
CGGTTGCGCG ACGAAATTGC CTATGCTCTT GGGCCGGACG CTCTTGAAAA CCTGCTGTCG
CTGCGCCATG TGGCTATTAG CCCCTGCGTG CGCAAACCTG GCGACCTGGA TATGGCCAGC
CTGACCCTGG CCGAGGAATT CGCAAAACTC GAGAGCATCG CGGGGTTGAA TGCTGAGCTG
GCGGAAGCCG AGGAAGATCT GGATGGTCTG GCGGATGAGG CCCTGACCTG GCGTTTGCGT
CAGGCGGCAG AGGCCCGCAA CCGGGCTGTG CGCAGCGAAA ATGAGGATAA GGCAACTTAC
GACGTGGGGG AGAACGGGGC GCGGCTCAAC CGGGATGAGC GCGATGCCTT CGGAGACCTG
CTCAAGCGAA TCGGTTTCAA CAGCAAATGA
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| Protein sequence | MSLPPGFLDE LRTRISLSDV VGRKVMWDQR KSQPGKGDMW SPCPFHHEKT ASFHVDDRKG
FYYCFGCHAK GDALKFVQET ENVSFMEAVE ILAGEAGLEM PKRDPKAAEK QDRRTQLAEV
MEQAVKYFRL QLKTQAASEA RAYLARRGLD AAALDRWEIG FAPDGWQNLW DALKGKDIAD
DLILGAGLAK PSNKGKKPYD VFRNRIMFPI RNARGRAIAF GGRAMDPNDN AKYLNSPETE
LFDKGRNLYN HGPARAASGR GSTLIVAEGY MDVIALSEAG FQSAVAPLGT AVTDNQLHLL
WRMSDEPVIA LDGDTAGLRA AMRLIDMALP LLEAGKSLRF AIMPEGKDPD DLIRAEGPEA
VQAVLDQAIP MVQLLWRRET EGRVFDSPER KAALDKSLRE KIKLIRDPSI RLHYANDIKE
LRFQLFRGQR GGGGQGGTGY GQRYGGFKPG SRMQGGFRDG ARMPWGAPPP PRSTTRASMV
ASSEEQDFAR VREAVILATA ITTPTVIPEF EINLERMQCQ DMEHAHLRDL VLRYGIEAPE
RLRDEIAYAL GPDALENLLS LRHVAISPCV RKPGDLDMAS LTLAEEFAKL ESIAGLNAEL
AEAEEDLDGL ADEALTWRLR QAAEARNRAV RSENEDKATY DVGENGARLN RDERDAFGDL
LKRIGFNSK
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